RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 ALDH3B2P48448 385 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 CLCN3P51790 818 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 NSUN2Q08J23 767 aaKnown RBP eCLIP11.1□□□□□ -0.63
TCF4-232ENST00000566286 BST2Q10589 180 aaKnown RBP11.1□□□□□ -0.63
TCF4-232ENST00000566286 TRIM25Q14258 630 aaKnown RBP11.1□□□□□ -0.63
TCF4-232ENST00000566286 CYTH1Q15438 398 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 MAPRE2Q15555 327 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 DLG2Q15700 870 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 LY6KQ17RY6 165 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 PID1Q7Z2X4 250 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 KCNMB4Q86W47 210 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 UNC93AQ86WB7 457 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 RNF148Q8N7C7 305 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 DNAAF3Q8N9W5 541 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 CHAC2Q8WUX2 184 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 TMA16Q96EY4 203 aaKnown RBP11.1□□□□□ -0.63
TCF4-232ENST00000566286 VPS39Q96JC1 886 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 PPP1R36Q96LQ0 422 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 MAGEB5Q9BZ81 275 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 DNAI2Q9GZS0 605 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 CAB39LQ9H9S4 337 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 PNPLA3Q9NST1 481 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 RNF181Q9P0P0 153 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 KLHL8Q9P2G9 620 aaPredicted RBP11.1□□□□□ -0.63
TCF4-232ENST00000566286 AP4S1Q9Y587 144 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 SNX9Q9Y5X1 595 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 EVPLQ92817 2033 aa11.1□□□□□ -0.63
TCF4-232ENST00000566286 MYOCOSA0A1B0GUC4 107 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 HBP1O60381 514 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 PDGFAP04085 211 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 COL6A2P12110 1019 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 CD1EP15812 388 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 BCAT1P54687 386 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 NFKB2Q00653 900 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 RHDQ02161 417 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 PAFAH1B3Q15102 231 aaKnown RBP11.09□□□□□ -0.63
TCF4-232ENST00000566286 SOWAHAQ2M3V2 549 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 HSDL1Q3SXM5 330 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 KRT80Q6KB66 452 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 LPCAT2Q7L5N7 544 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 CARM1Q86X55 608 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 CHPFQ8IZ52 775 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 PYROXD2Q8N2H3 581 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 HM13Q8TCT9 377 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 RNF139Q8WU17 664 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 AGAP2Q99490 1192 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 GPR22Q99680 433 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 EFHD1Q9BUP0 239 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 CEP41Q9BYV8 373 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 PRDM12Q9H4Q4 367 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 TBCCD1Q9NVR7 557 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 ZDHHC2Q9UIJ5 367 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 COPG1Q9Y678 874 aaKnown RBP11.09□□□□□ -0.63
TCF4-232ENST00000566286 TCAF2A6NFQ2 919 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 TK2O00142 265 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 MYCLP1P12525 358 aaPredicted RBP11.09□□□□□ -0.63
TCF4-232ENST00000566286 MATKP42679 507 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 NPY2RP49146 381 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 RPL34P49207 117 aaKnown RBP11.09□□□□□ -0.63
TCF4-232ENST00000566286 CSRP3P50461 194 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 SCNN1BP51168 640 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 NAGLUP54802 743 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 NUP107P57740 925 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 TRAP1Q12931 704 aaKnown RBP11.09□□□□□ -0.63
TCF4-232ENST00000566286 STX5Q13190 355 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 TMED1Q13445 227 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 IKBKEQ14164 716 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 KIZQ2M2Z5 673 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 TMEM95Q3KNT9 176 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 TREML2Q5T2D2 321 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 IL23RQ5VWK5 629 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 TMEM198Q66K66 360 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 DHRS4L2Q6PKH6 230 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 PAOXQ6QHF9 649 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 PDZD4Q76G19 769 aaPredicted RBP11.09□□□□□ -0.63
TCF4-232ENST00000566286 CLEC4CQ8WTT0 213 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 STYXQ8WUJ0 223 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 TRAPPC12Q8WVT3 735 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 DUS3LQ96G46 650 aaKnown RBP11.09□□□□□ -0.63
TCF4-232ENST00000566286 RMND5BQ96G75 393 aaPredicted RBP11.09□□□□□ -0.63
TCF4-232ENST00000566286 MAELQ96JY0 434 aaKnown RBP11.09□□□□□ -0.63
TCF4-232ENST00000566286 MRPL45Q9BRJ2 306 aaKnown RBP11.09□□□□□ -0.63
TCF4-232ENST00000566286 MCMBPQ9BTE3 642 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 UNC93B1Q9H1C4 597 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 SMARCAD1Q9H4L7 1026 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 C20orf96Q9NUD7 363 aaPredicted RBP11.09□□□□□ -0.63
TCF4-232ENST00000566286 ADA2Q9NZK5 511 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 SLC39A10Q9ULF5 831 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 RNF11Q9Y3C5 154 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 RAD54BQ9Y620 910 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 LRRC37A2A6NM11 1700 aa11.09□□□□□ -0.63
TCF4-232ENST00000566286 C7orf72A4D263 438 aa11.08□□□□□ -0.64
TCF4-232ENST00000566286 SOWAHBA6NEL2 793 aa11.08□□□□□ -0.64
TCF4-232ENST00000566286 C9IYK1 514 aa11.08□□□□□ -0.64
TCF4-232ENST00000566286 H3BNH8 94 aa11.08□□□□□ -0.64
TCF4-232ENST00000566286 STX16-NPEPL1H3BU86 382 aa11.08□□□□□ -0.64
TCF4-232ENST00000566286 AP3B1O00203 1094 aa11.08□□□□□ -0.64
TCF4-232ENST00000566286 GALK1P51570 392 aa11.08□□□□□ -0.64
TCF4-232ENST00000566286 ATXN3P54252 364 aaPredicted RBP11.08□□□□□ -0.64
TCF4-232ENST00000566286 PSME3P61289 254 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms