RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 TPX2Q9ULW0 747 aaKnown RBP13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 DMTF1Q9Y222 760 aa13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 PCDHGB2Q9Y5G2 931 aa13.84□□□□□ -0.19
VPS9D1-204ENST00000565023 ZSCAN5CA6NGD5 496 aaPredicted RBP13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 C16orf96A6NNT2 1141 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 WASH4PA8MWX3 477 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 C1QTNF9BB2RNN3 333 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 C10orf142B7Z368 130 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 J3KR12 359 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 INSIG1O15503 277 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 AKR1B10O60218 316 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 SDC3O75056 442 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 CBFA2T3O75081 653 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 IGSF6O95976 241 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 CYP1A2P05177 515 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 ATXN1LP0C7T5 689 aaKnown RBP13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 C1QTNF9P0C862 333 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 THEGLP0DJG4 465 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 ERCC2P18074 760 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 AKT2P31751 481 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 GRK6P43250 576 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 PAPOLAP51003 745 aaKnown RBP13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 SHC2P98077 582 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 BNIP3Q12983 259 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 SERINC3Q13530 473 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 CYTH1Q15438 398 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 SHBQ15464 509 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 PARP15Q460N3 678 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 RFX8Q6ZV50 586 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 SLCO6A1Q86UG4 719 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 SPATS2Q86XZ4 545 aaKnown RBP13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 MFSD2AQ8NA29 543 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 ARHGEF26Q96DR7 871 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 KLHDC7BQ96G42 594 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 CCDC42Q96M95 316 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 NUP85Q9BW27 656 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 CAAP1Q9H8G2 361 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 LHX3Q9UBR4 397 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 UBA2Q9UBT2 640 aaPredicted RBP13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 ANAPC7Q9UJX3 599 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 APOBEC2Q9Y235 224 aaKnown RBP13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 MFHAS1Q9Y4C4 1052 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 FADS3Q9Y5Q0 445 aa13.83□□□□□ -0.2
VPS9D1-204ENST00000565023 ARHGAP42A6NI28 874 aa13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 DFNA5O60443 496 aa13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 PIGNO95427 931 aa13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 POP4O95707 220 aaKnown RBP13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 PAK4O96013 591 aaPredicted RBP13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 ITIH2P19823 946 aa13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 HNRNPA2B1P22626 353 aaKnown RBP13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 FECHP22830 423 aa13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 IL1R2P27930 398 aa13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 RAD51Q06609 339 aa13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 ZNF284Q2VY69 593 aa13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 ZNF805Q5CZA5 627 aa13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 NEK5Q6P3R8 708 aa13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 GDPD4Q6W3E5 623 aa13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 ARHGAP36Q6ZRI8 547 aa13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 CYP4V2Q6ZWL3 525 aaPredicted RBP13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 PTAR1Q7Z6K3 402 aaPredicted RBP13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 UMODL1-AS1Q8N2C9 162 aa13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 EID2Q8N6I1 236 aa13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 PAF1Q8N7H5 531 aa13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 PANX2Q96RD6 677 aa13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 SP110Q9HB58 689 aa13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 CWC15Q9P013 229 aaKnown RBP13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 FTSJ1Q9UET6 329 aa13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 WASF3Q9UPY6 502 aa13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 PTPRBP23467 1997 aa13.82□□□□□ -0.2
VPS9D1-204ENST00000565023 LRRK1Q38SD2 2015 aa13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 IGLON5A6NGN9 336 aa13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 PCDHGA12O60330 932 aa13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 MAGEC1O60732 1142 aa13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 XPAP23025 273 aaPredicted RBP13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 AMPD1P23109 780 aa13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 EPHA8P29322 1005 aaPredicted RBP13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 NUDT1P36639 197 aa13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 ARRB1P49407 418 aaPredicted RBP13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 NDST2P52849 883 aa13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 FGL2Q14314 439 aa13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 INAVAQ3KP66 663 aa13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 TXNRD3NBQ6F5E7 133 aa13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 UNQ6494/PRO21346Q6UXR6 183 aa13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 KDM7AQ6ZMT4 941 aa13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 DBX2Q6ZNG2 339 aa13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 TTC7BQ86TV6 843 aa13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 TP53INP2Q8IXH6 220 aa13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 NPWQ8N729 165 aa13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 OR13H1Q8NG92 308 aa13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 BAHD1Q8TBE0 780 aaPredicted RBP13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 CASKIN2Q8WXE0 1202 aa13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 FEM1CQ96JP0 617 aa13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 CDC6Q99741 560 aa13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 PACSIN1Q9BY11 444 aa13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 SLC17A9Q9BYT1 436 aa13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 LRRC19Q9H756 370 aa13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 SPTLC3Q9NUV7 552 aa13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 IMPACTQ9P2X3 320 aa13.81□□□□□ -0.2
VPS9D1-204ENST00000565023 TMEM110-MUSTN1A8MSY1 372 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms