RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 CENPIQ92674 756 aaPredicted RBP11.95□□□□□ -0.5
ABCA3-203ENST00000563623 WDCPQ9H6R7 721 aa11.95□□□□□ -0.5
ABCA3-203ENST00000563623 UBQLN1Q9UMX0 589 aaKnown RBP11.95□□□□□ -0.5
ABCA3-203ENST00000563623 C9IYK1 514 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 SPTLC1O15269 473 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 CDK4P11802 303 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 NAT1P18440 290 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 CD151P48509 253 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 GJA9P57773 515 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 RAB10P61026 200 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 TRIM25Q14258 630 aaKnown RBP11.94□□□□□ -0.5
ABCA3-203ENST00000563623 GRIK4Q16099 956 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 UGP2Q16851 508 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 WSCD1Q658N2 575 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 TMEM135Q86UB9 458 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 NUP93Q8N1F7 819 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 PPHLN1Q8NEY8 458 aaKnown RBP11.94□□□□□ -0.5
ABCA3-203ENST00000563623 ZNF560Q96MR9 790 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 SLC29A1Q99808 456 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 MRPL46Q9H2W6 279 aaKnown RBP11.94□□□□□ -0.5
ABCA3-203ENST00000563623 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.94□□□□□ -0.5
ABCA3-203ENST00000563623 SLC2A6Q9UGQ3 507 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 CROTQ9UKG9 612 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 C7orf72A4D263 438 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 NRP1O14786 923 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 UGT1A6P19224 532 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 LPIN1Q14693 890 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 ARHGAP17Q68EM7 881 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 GPR141Q7Z602 305 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 DHFR2Q86XF0 187 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 CEP97Q8IW35 865 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 DDIASQ8IXT1 998 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 TMCO5AQ8N6Q1 288 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 NPWQ8N729 165 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 HEXDCQ8WVB3 486 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 THAP11Q96EK4 314 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 TKTL2Q9H0I9 626 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 PIF1Q9H611 641 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 RRN3Q9NYV6 651 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 OR12D3Q9UGF7 316 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 ANKRD6Q9Y2G4 727 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 MAGEB16A2A368 324 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 TCAF2A6NFQ2 919 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 YJEFN3A6XGL0 299 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 PDLIM1O00151 329 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 SLC35E2BP0CK96 405 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 EEF1B2P24534 225 aaKnown RBP11.94□□□□□ -0.5
ABCA3-203ENST00000563623 CDH13P55290 713 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 MAPRE2Q15555 327 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 HABP4Q5JVS0 413 aaKnown RBP11.94□□□□□ -0.5
ABCA3-203ENST00000563623 TBCELQ5QJ74 424 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 SLC27A1Q6PCB7 646 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 CNSTQ6PJW8 725 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 USP3Q9Y6I4 520 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 PHIPQ8WWQ0 1821 aa11.94□□□□□ -0.5
ABCA3-203ENST00000563623 CCL22O00626 93 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 CRCPO75575 148 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 CYP2B6P20813 491 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 CD68P34810 354 aaPredicted RBP11.93□□□□□ -0.5
ABCA3-203ENST00000563623 IKBKEQ14164 716 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 KCTD21Q4G0X4 260 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 PABPC1LQ4VXU2 614 aaKnown RBP11.93□□□□□ -0.5
ABCA3-203ENST00000563623 REP15Q6BDI9 236 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 CNTD1Q8N815 330 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 TXNDC5Q8NBS9 432 aaKnown RBP11.93□□□□□ -0.5
ABCA3-203ENST00000563623 RNF169Q8NCN4 708 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 GBA3Q9H227 469 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 RNF39Q9H2S5 420 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 ZNF696Q9H7X3 374 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 FBRSL1Q9HCM7 1045 aaKnown RBP11.93□□□□□ -0.5
ABCA3-203ENST00000563623 CASS4Q9NQ75 786 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 DSEQ9UL01 958 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 A0A0J9YVX5 310 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 NFKBIEO00221 500 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 SDHDO14521 159 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 DAB1O75553 588 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 PGK1P00558 417 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 NPR3P17342 541 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 YWHAQP27348 245 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 STT3AP46977 705 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 KPNA2P52292 529 aaKnown RBP11.93□□□□□ -0.5
ABCA3-203ENST00000563623 ADRM1Q16186 407 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 DCAF4L1Q3SXM0 396 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 LDB1Q86U70 411 aaPredicted RBP11.93□□□□□ -0.5
ABCA3-203ENST00000563623 ATPAF2Q8N5M1 289 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 GPR22Q99680 433 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 SENP6Q9GZR1 1112 aaPredicted RBP11.93□□□□□ -0.5
ABCA3-203ENST00000563623 MRPL40Q9NQ50 206 aaKnown RBP11.93□□□□□ -0.5
ABCA3-203ENST00000563623 RCOR3Q9P2K3 495 aaPredicted RBP11.93□□□□□ -0.5
ABCA3-203ENST00000563623 SFMBT1Q9UHJ3 866 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 PRSS51A0A1B0GVH4 220 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 ZNF487B1APH4 448 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 SOCS7O14512 581 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 USP2O75604 605 aaPredicted RBP11.93□□□□□ -0.5
ABCA3-203ENST00000563623 H6PDO95479 791 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 CLIC3O95833 236 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 PENKP01210 267 aaPredicted RBP11.93□□□□□ -0.5
ABCA3-203ENST00000563623 MT-ND1P03886 318 aa11.93□□□□□ -0.5
ABCA3-203ENST00000563623 SNRPB2P08579 225 aaKnown RBP11.93□□□□□ -0.5
ABCA3-203ENST00000563623 CCDC166P0CW27 439 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms