RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 CTAGE1Q96RT6 745 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 INTS14Q96SY0 518 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 PAFAH2Q99487 392 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 ZNF341Q9BYN7 854 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 WDR11Q9BZH6 1224 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 RWDD1Q9H446 243 aaPredicted RBP5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 NCOR1P1Q9H4R4 102 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 ALKBH4Q9NXW9 302 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 CYP39A1Q9NYL5 469 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 WSB2Q9NYS7 404 aaPredicted RBP5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 SEPT10Q9P0V9 454 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 NCDNQ9UBB6 729 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 CDYLQ9Y232 598 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 PCDHB7Q9Y5E2 793 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 PCDHA10Q9Y5I2 948 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 MROH5Q6ZUA9 1318 aa5.36□□□□□ -1.55
VPS35P1-201ENST00000563400 KCPQ6ZWJ8 1503 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 A0A0G2JPF8 293 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 TCRBV7S2A1N4TA0A589 114 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 AGAP5A6NIR3 686 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 ENO4A6NNW6 628 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 A8MZ25 164 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 HNRNPCL3B7ZW38 293 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 ZNF185O15231 689 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 KIF1CO43896 1103 aaKnown RBP5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 RASAL1O95294 804 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 LARGE1O95461 756 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 ALPPP05187 535 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 TPBGLP0DKB5 382 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 HNRNPCL4P0DMR1 293 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 ALPPL2P10696 532 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 PIM1P11309 404 aaPredicted RBP5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 CHN1P15882 459 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 CCNCP24863 283 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 NTSR1P30989 418 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 MAGEA4P43358 317 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 SLC6A11P48066 632 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 PITPNBP48739 271 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 CLCN7P51798 805 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 ZNF135P52742 658 aaPredicted RBP5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 PMS2P54278 862 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 EIF3BP55884 814 aaKnown RBP5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 GMFBP60983 142 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 PRAMEP78395 509 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 GRAPQ13588 217 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 TRADDQ15628 312 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 CCDC40Q4G0X9 1142 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 PABPC1LQ4VXU2 614 aaKnown RBP5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 STXBP5Q5T5C0 1151 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 BEND3Q5T5X7 828 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 SUSD4Q5VX71 490 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 CST9LP1Q5W188 147 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 CES4AQ5XG92 561 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 PRR5LQ6MZQ0 368 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 SERPINA13PQ6UXR4 307 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 DPP8Q6V1X1 898 aaPredicted RBP5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 C22orf34Q6ZV56 151 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 DZIP1Q86YF9 867 aaKnown RBP5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 FAM46DQ8NEK8 389 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 OR6C4Q8NGE1 309 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 GRAPLQ8TC17 118 aaPredicted RBP5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 SLC13A3Q8WWT9 602 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 ANP32BQ92688 251 aaKnown RBP5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 RAB7BQ96AH8 199 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 RNFT2Q96EX2 444 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 INTS4Q96HW7 963 aaKnown RBP5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 RUFY1Q96T51 708 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 CLSTN3Q9BQT9 956 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 ERP44Q9BS26 406 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 TM9SF3Q9HD45 589 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 SPATA6Q9NWH7 488 aaPredicted RBP5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 LMCD1Q9NZU5 365 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 HMG20BQ9P0W2 317 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 HCN3Q9P1Z3 774 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 CFAP97Q9P2B7 532 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 LRIT1Q9P2V4 623 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 CLIP2Q9UDT6 1046 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 ZMAT5Q9UDW3 170 aaKnown RBP5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 FBXL17Q9UF56 701 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 ARMCX3Q9UH62 379 aaPredicted RBP5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 DUSP13Q9UII6 198 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 ENTPD2Q9Y5L3 495 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 NFS1Q9Y697 457 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 CAPN7Q9Y6W3 813 aa5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 TNS1Q9HBL0 1735 aaKnown RBP5.35□□□□□ -1.55
VPS35P1-201ENST00000563400 DLG5Q8TDM6 1919 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 CYP2D7A0A087X1C5 515 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 AQP7P3A6NL99 342 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 LACTBL1A8MY62 500 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 KCNJ18B7U540 433 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 TEX22C9J3V5 150 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 CCP110O43303 1012 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 MMP2P08253 660 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 COX7A2P14406 83 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 ZFXP17010 805 aaPredicted RBP5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 JUNBP17275 347 aaPredicted RBP5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 CDH2P19022 906 aaPredicted RBP5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 PTPN7P35236 360 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 PNPLA4P41247 253 aa5.34□□□□□ -1.55
VPS35P1-201ENST00000563400 GPD2P43304 727 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms