RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 OPN1LWP04000 364 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 CNPP09543 421 aaKnown RBP4.85□□□□□ -1.63
SMG1-207ENST00000563235 PRKACAP17612 351 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 TNFRSF1AP19438 455 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 FUT1P19526 365 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 SFNP31947 248 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 CTSOP43234 321 aaPredicted RBP4.85□□□□□ -1.63
SMG1-207ENST00000563235 LEPRP48357 1165 aaKnown RBP4.85□□□□□ -1.63
SMG1-207ENST00000563235 GDI2P50395 445 aaKnown RBP4.85□□□□□ -1.63
SMG1-207ENST00000563235 CCR4P51679 360 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 ALDH18A1P54886 795 aaKnown RBP4.85□□□□□ -1.63
SMG1-207ENST00000563235 EEF1A1P68104 462 aaKnown RBP4.85□□□□□ -1.63
SMG1-207ENST00000563235 PHEXP78562 749 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 EEF1A2Q05639 463 aaKnown RBP4.85□□□□□ -1.63
SMG1-207ENST00000563235 SCN1BQ07699 218 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 SNTB1Q13884 538 aaKnown RBP4.85□□□□□ -1.63
SMG1-207ENST00000563235 BOP1Q14137 746 aaKnown RBP4.85□□□□□ -1.63
SMG1-207ENST00000563235 NOLC1Q14978 699 aaKnown RBP eCLIP4.85□□□□□ -1.63
SMG1-207ENST00000563235 BTBD16Q32M84 506 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 PITRM1Q5JRX3 1037 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 EEF1A1P5Q5VTE0 462 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 KRT80Q6KB66 452 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 KIAA1161Q6NSJ0 714 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 CYB5D1Q6P9G0 228 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 CYP4V2Q6ZWL3 525 aaPredicted RBP4.85□□□□□ -1.63
SMG1-207ENST00000563235 SYT13Q7L8C5 426 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 TRAPPC11Q7Z392 1133 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 CCDC103Q8IW40 242 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 CCDC24Q8N4L8 307 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 ARFGAP2Q8N6H7 521 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 ENDOVQ8N8Q3 282 aaKnown RBP4.85□□□□□ -1.63
SMG1-207ENST00000563235 SYT2Q8N9I0 419 aaPredicted RBP4.85□□□□□ -1.63
SMG1-207ENST00000563235 CCDC63Q8NA47 563 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 ATAD1Q8NBU5 361 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 RCBTB1Q8NDN9 531 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 IRGQQ8WZA9 623 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 SNF8Q96H20 258 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 TSNARE1Q96NA8 513 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 SELENOSQ9BQE4 189 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 C1QTNF3Q9BXJ4 246 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 KLC2Q9H0B6 622 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 TM7SF3Q9NS93 570 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 DDX28Q9NUL7 540 aaKnown RBP4.85□□□□□ -1.63
SMG1-207ENST00000563235 NDUFAF4Q9P032 175 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 GULP1Q9UBP9 304 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 IL20RAQ9UHF4 553 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 MINPP1Q9UNW1 487 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 MTUS2Q5JR59 1369 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 RALGAPBQ86X10 1494 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 FYCO1Q9BQS8 1478 aa4.85□□□□□ -1.63
SMG1-207ENST00000563235 ERICH2A1L162 156 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 LIPT2A6NK58 231 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 IQCF5A8MTL0 148 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 CTDSP2O14595 271 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 ZNF197O14709 1029 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 RASGRF2O14827 1237 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 NME6O75414 186 aaPredicted RBP4.84□□□□□ -1.63
SMG1-207ENST00000563235 ADH1BP00325 375 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 MT-ND5P03915 603 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 SPARCP09486 303 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 PNMA6AP0CW24 399 aaPredicted RBP4.84□□□□□ -1.63
SMG1-207ENST00000563235 CDC25AP30304 524 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 CDC25BP30305 580 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 NRIP1P48552 1158 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 ATP12AP54707 1039 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 PRMT2P55345 433 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 LACTBP83111 547 aaPredicted RBP4.84□□□□□ -1.63
SMG1-207ENST00000563235 SRSF5Q13243 272 aaKnown RBP4.84□□□□□ -1.63
SMG1-207ENST00000563235 PDCLQ13371 301 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 RARS2Q5T160 578 aaKnown RBP4.84□□□□□ -1.63
SMG1-207ENST00000563235 ATAD3BQ5T9A4 648 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 ZNF658Q5TYW1 1059 aaPredicted RBP4.84□□□□□ -1.63
SMG1-207ENST00000563235 ZNF385CQ66K41 422 aaPredicted RBP4.84□□□□□ -1.63
SMG1-207ENST00000563235 MTSS1LQ765P7 747 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 ANKS1BQ7Z6G8 1248 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 USP37Q86T82 979 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 CDR2LQ86X02 465 aaPredicted RBP4.84□□□□□ -1.63
SMG1-207ENST00000563235 DNAAF5Q86Y56 855 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 CRYBG2Q8N1P7 616 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 SETD9Q8NE22 299 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 C17orf47Q8NEP4 570 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 BPIFCQ8NFQ6 507 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 BBS10Q8TAM1 723 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 BRIX1Q8TDN6 353 aaKnown RBP4.84□□□□□ -1.63
SMG1-207ENST00000563235 ACTRT2Q8TDY3 377 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 CKAP2Q8WWK9 683 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 WFDC12Q8WWY7 111 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 PLPPR2Q96GM1 343 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 CIB1Q99828 191 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 TRIM31Q9BZY9 425 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 SUGCTQ9HAC7 445 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 NECTIN3Q9NQS3 549 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 PKD2L1Q9P0L9 805 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 CGGBP1Q9UFW8 167 aaPredicted RBP4.84□□□□□ -1.63
SMG1-207ENST00000563235 TUBE1Q9UJT0 475 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 PCDHA6Q9UN73 950 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 TBC1D30Q9Y2I9 924 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 SRPRBQ9Y5M8 271 aaKnown RBP4.84□□□□□ -1.63
SMG1-207ENST00000563235 CSADQ9Y600 493 aa4.84□□□□□ -1.63
SMG1-207ENST00000563235 KIF15Q9NS87 1388 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms