RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 TJP3O95049 919 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 LMNAP02545 664 aaKnown RBP13.59□□□□□ -0.23
CDH1-204ENST00000562118 CCNB1P14635 433 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 GKP32189 559 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 HOXD12P35452 270 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 CNTN1Q12860 1018 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 ZBTB17Q13105 803 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 ODF2Q5BJF6 829 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 PLA2G2CQ5R387 149 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 PARS2Q7L3T8 475 aaKnown RBP13.59□□□□□ -0.23
CDH1-204ENST00000562118 SRLQ86TD4 932 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 CCDC50Q8IVM0 306 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 C1orf216Q8TAB5 229 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 ARRDC2Q8TBH0 407 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 DNASE2BQ8WZ79 361 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 P3H4Q92791 437 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 PPP1R16AQ96I34 528 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 BTBD1Q9H0C5 482 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 ZDHHC6Q9H6R6 413 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 SAE1Q9UBE0 346 aaPredicted RBP13.59□□□□□ -0.23
CDH1-204ENST00000562118 EVLQ9UI08 416 aaPredicted RBP13.59□□□□□ -0.23
CDH1-204ENST00000562118 JRKLQ9Y4A0 524 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 PCDHGA5Q9Y5G8 931 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 HEY1Q9Y5J3 304 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.59□□□□□ -0.23
CDH1-204ENST00000562118 TP53BP1Q12888 1972 aaPredicted RBP13.59□□□□□ -0.23
CDH1-204ENST00000562118 DOCK9Q9BZ29 2069 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 METTL12A8MUP2 240 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 AREL1O15033 823 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 FZD6O60353 706 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 LRP3O75074 770 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 GJB3O75712 270 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 RHOBTB1O94844 696 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 SEMA4FO95754 770 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 HLA-DQB2P05538 268 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 IGHV4-34P06331 123 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 ADRB3P13945 408 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 TGM1P22735 817 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 CES1P23141 567 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 PLA2G5P39877 138 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 CCR5P51681 352 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 SUOXP51687 545 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 DYNLT1P63172 113 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 RAD51Q06609 339 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 WASHC5Q12768 1159 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 ZNF211Q13398 564 aaPredicted RBP13.58□□□□□ -0.24
CDH1-204ENST00000562118 ZNF235Q14590 738 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 RPS6KA1Q15418 735 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 SIX1Q15475 284 aaPredicted RBP13.58□□□□□ -0.24
CDH1-204ENST00000562118 SLC45A4Q5BKX6 768 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 KAZNQ674X7 775 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 NEK5Q6P3R8 708 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 GDPD4Q6W3E5 623 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 ERN2Q76MJ5 926 aaKnown RBP13.58□□□□□ -0.24
CDH1-204ENST00000562118 TRIM69Q86WT6 500 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 CACUL1Q86Y37 369 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 KLHDC8BQ8IXV7 354 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 HDDC3Q8N4P3 179 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 OR2T34Q8NGX1 318 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 OR6K2Q8NGY2 324 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 ACTL9Q8TC94 416 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 GRIN3AQ8TCU5 1115 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 NKD2Q969F2 451 aaPredicted RBP13.58□□□□□ -0.24
CDH1-204ENST00000562118 RAB7BQ96AH8 199 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 EXOC2Q96KP1 924 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 HEMGNQ9BXL5 484 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 POLR1EQ9GZS1 481 aaKnown RBP13.58□□□□□ -0.24
CDH1-204ENST00000562118 PREBQ9HCU5 417 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 NCKAP1Q9Y2A7 1128 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 RIF1Q5UIP0 2472 aaKnown RBP13.58□□□□□ -0.24
CDH1-204ENST00000562118 PI4KAP42356 2102 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 FAM186AA6NE01 2351 aa13.58□□□□□ -0.24
CDH1-204ENST00000562118 RALGAPA1Q6GYQ0 2036 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.57□□□□□ -0.24
CDH1-204ENST00000562118 BCLAF3A2AJT9 711 aaKnown RBP13.57□□□□□ -0.24
CDH1-204ENST00000562118 C16orf96A6NNT2 1141 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 KRIT1O00522 736 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 MTSS1O43312 755 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 RNASEH2AO75792 299 aaKnown RBP13.57□□□□□ -0.24
CDH1-204ENST00000562118 ZNF189O75820 626 aaPredicted RBP13.57□□□□□ -0.24
CDH1-204ENST00000562118 RETP07949 1114 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 MMP2P08253 660 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 PTPN3P26045 913 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 CETN2P41208 172 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 ABL2P42684 1182 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 PTGER3P43115 390 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 NEK3P51956 506 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 OTUD4Q01804 1114 aaKnown RBP13.57□□□□□ -0.24
CDH1-204ENST00000562118 RPL6Q02878 288 aaKnown RBP13.57□□□□□ -0.24
CDH1-204ENST00000562118 ELF2Q15723 593 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 TMEM259Q4ZIN3 620 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 TEX44Q53QW1 395 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 BRAT1Q6PJG6 821 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 LPCAT2Q7L5N7 544 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 ASCL5Q7RTU5 278 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 ZSCAN30Q86W11 494 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 ZSWIM9Q86XI8 627 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 SLC13A5Q86YT5 568 aaPredicted RBP13.57□□□□□ -0.24
CDH1-204ENST00000562118 BBS5Q8N3I7 341 aa13.57□□□□□ -0.24
CDH1-204ENST00000562118 RASGEF1CQ8N431 466 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms