RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 NOD2Q9HC29 1040 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 EPB41L5Q9HCM4 733 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 GDF3Q9NR23 364 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 VPS45Q9NRW7 570 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 FAM114A2Q9NRY5 505 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 CACNA2D2Q9NY47 1150 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 FAM153AQ9UHL3 310 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 TPX2Q9ULW0 747 aaKnown RBP12.82□□□□□ -0.36
CMTM4-203ENST00000561680 NDRG2Q9UN36 371 aaKnown RBP12.82□□□□□ -0.36
CMTM4-203ENST00000561680 SHOC2Q9UQ13 582 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 MRPS17Q9Y2R5 130 aaKnown RBP12.82□□□□□ -0.36
CMTM4-203ENST00000561680 AAR2Q9Y312 384 aaKnown RBP12.82□□□□□ -0.36
CMTM4-203ENST00000561680 SNX24Q9Y343 169 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 STON1Q9Y6Q2 735 aa12.82□□□□□ -0.36
CMTM4-203ENST00000561680 GOLGA6CA6NDK9 693 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 GOLGA6BA6NDN3 693 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 ERI2A8K979 691 aaKnown RBP12.81□□□□□ -0.36
CMTM4-203ENST00000561680 WASH3PC4AMC7 463 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 NDC80O14777 642 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 PSMD3O43242 534 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 AP2A1O95782 977 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 GOLGA6DP0CG33 693 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 TARSP26639 723 aaKnown RBP12.81□□□□□ -0.36
CMTM4-203ENST00000561680 RECQLP46063 649 aaPredicted RBP12.81□□□□□ -0.36
CMTM4-203ENST00000561680 ITGA8P53708 1063 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 CALCOCO2Q13137 446 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 MORF4L2Q15014 288 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 TRADDQ15628 312 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 HSF5Q4G112 596 aaPredicted RBP12.81□□□□□ -0.36
CMTM4-203ENST00000561680 ANKRD22Q5VYY1 191 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 HIBCHQ6NVY1 386 aaPredicted RBP12.81□□□□□ -0.36
CMTM4-203ENST00000561680 KDELC1Q6UW63 502 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 DPY19L3Q6ZPD9 716 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 TRMT11Q7Z4G4 463 aaKnown RBP12.81□□□□□ -0.36
CMTM4-203ENST00000561680 PPIL6Q8IXY8 311 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 SIX5Q8N196 739 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 NAT8LQ8N9F0 302 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 IL17RCQ8NAC3 791 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 BBOF1Q8ND07 529 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 OR6K2Q8NGY2 324 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 PRCCQ92733 491 aaPredicted RBP12.81□□□□□ -0.36
CMTM4-203ENST00000561680 VOPP1Q96AW1 172 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 TUBGCP5Q96RT8 1024 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 GABRG3Q99928 467 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 HINFPQ9BQA5 517 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 CPEB1Q9BZB8 566 aaKnown RBP12.81□□□□□ -0.36
CMTM4-203ENST00000561680 FAM129AQ9BZQ8 928 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 MTG2Q9H4K7 406 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 LRRC40Q9H9A6 602 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 LTB4R2Q9NPC1 389 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 ZDHHC4Q9NPG8 344 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 GOLGA6AQ9NYA3 693 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 UBP1Q9NZI7 540 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 HECAQ9UBI9 543 aaPredicted RBP12.81□□□□□ -0.36
CMTM4-203ENST00000561680 SUN2Q9UH99 717 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 EVLQ9UI08 416 aaPredicted RBP12.81□□□□□ -0.36
CMTM4-203ENST00000561680 PLXNB3Q9ULL4 1909 aa12.81□□□□□ -0.36
CMTM4-203ENST00000561680 CACNA1IQ9P0X4 2223 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.8□□□□□ -0.36
CMTM4-203ENST00000561680 TCRBV7S3A2A0A539 114 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 KANSL1LA0AUZ9 987 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 E7EVH7 732 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 SMAPO00193 183 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 ALOX15BO15296 676 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 CTIFO43310 598 aaKnown RBP12.8□□□□□ -0.36
CMTM4-203ENST00000561680 RNF40O75150 1001 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 SOCS5O75159 536 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 SIN3BO75182 1162 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 TMEM63AO94886 807 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 SUN1O94901 812 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 KLF8O95600 359 aaPredicted RBP12.8□□□□□ -0.36
CMTM4-203ENST00000561680 POP4O95707 220 aaKnown RBP12.8□□□□□ -0.36
CMTM4-203ENST00000561680 EPHX1P07099 455 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 APRTP07741 180 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 CHRNB1P11230 501 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 ITIH2P19823 946 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 TNFRSF8P28908 595 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 NTSR1P30989 418 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 ZXDAP98168 799 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 CDK16Q00536 496 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 CUL1Q13616 776 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 LRRC32Q14392 662 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 GRM3Q14832 879 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 MYLK3Q32MK0 819 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 C2orf27AQ580R0 203 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 SYCP2LQ5T4T6 812 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 C9orf64Q5T6V5 341 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 ZDHHC24Q6UX98 284 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 IFT20Q8IY31 132 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 CHPFQ8IZ52 775 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 SYNPOQ8N3V7 929 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 GPR161Q8N6U8 529 aaKnown RBP12.8□□□□□ -0.36
CMTM4-203ENST00000561680 PDCD7Q8N8D1 485 aaKnown RBP12.8□□□□□ -0.36
CMTM4-203ENST00000561680 CHST14Q8NCH0 376 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 ART4Q93070 314 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 MRGPRX2Q96LB1 330 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 TDRD1Q9BXT4 1180 aaKnown RBP12.8□□□□□ -0.36
CMTM4-203ENST00000561680 EPC1Q9H2F5 836 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 ATP13A3Q9H7F0 1226 aa12.8□□□□□ -0.36
CMTM4-203ENST00000561680 TBC1D17Q9HA65 648 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms