RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 ITM2BQ9Y287 266 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 CA5BQ9Y2D0 317 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 CABIN1Q9Y6J0 2220 aa14.09□□□□□ -0.15
TPM1-230ENST00000561266 A0A1W2PPC4 97 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 BTNL10A8MVZ5 291 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 BCAT2O15382 392 aaPredicted RBP14.08□□□□□ -0.16
TPM1-230ENST00000561266 SLC7A4O43246 635 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 LATO43561 262 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 IGSF6O95976 241 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 SERPINF2P08697 491 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 KRT10P13645 584 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 ADRB3P13945 408 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 TIMP2P16035 220 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 ENGP17813 658 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 CR2P20023 1033 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 CDKN2BP42772 138 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 CSNK1EP49674 416 aaKnown RBP14.08□□□□□ -0.16
TPM1-230ENST00000561266 CCR5P51681 352 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 MAXP61244 160 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 LBRQ14739 615 aaKnown RBP14.08□□□□□ -0.16
TPM1-230ENST00000561266 ZNF805Q5CZA5 627 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 WDR45BQ5MNZ6 344 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 ZFYVE27Q5T4F4 411 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 SYCP2LQ5T4T6 812 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 SEL1L3Q68CR1 1132 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 SLC9A4Q6AI14 798 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 C11orf63Q6NUN7 778 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 GDPD4Q6W3E5 623 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 SRLQ86TD4 932 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 CAMK1DQ8IU85 385 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 C12orf50Q8NA57 414 aaPredicted RBP14.08□□□□□ -0.16
TPM1-230ENST00000561266 SLC6A18Q96N87 628 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 EDEM2Q9BV94 578 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 TM9SF3Q9HD45 589 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 DONSONQ9NYP3 566 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 SAE1Q9UBE0 346 aaPredicted RBP14.08□□□□□ -0.16
TPM1-230ENST00000561266 SLC6A14Q9UN76 642 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 FADS3Q9Y5Q0 445 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 ADGRG1Q9Y653 693 aa14.08□□□□□ -0.16
TPM1-230ENST00000561266 A0A1B0GTW7 788 aa14.07□□□□□ -0.16
TPM1-230ENST00000561266 A0A1B0GVT2 93 aa14.07□□□□□ -0.16
TPM1-230ENST00000561266 LRRC72A6NJI9 287 aa14.07□□□□□ -0.16
TPM1-230ENST00000561266 C4orf47A7E2U8 309 aa14.07□□□□□ -0.16
TPM1-230ENST00000561266 KCNK3O14649 394 aa14.07□□□□□ -0.16
TPM1-230ENST00000561266 TM4SF5O14894 197 aa14.07□□□□□ -0.16
TPM1-230ENST00000561266 RNGTTO60942 597 aaKnown RBP14.07□□□□□ -0.16
TPM1-230ENST00000561266 PRKCGP05129 697 aa14.07□□□□□ -0.16
TPM1-230ENST00000561266 CD27P26842 260 aa14.07□□□□□ -0.16
TPM1-230ENST00000561266 HOXD12P35452 270 aa14.07□□□□□ -0.16
TPM1-230ENST00000561266 GARSP41250 739 aaKnown RBP14.07□□□□□ -0.16
TPM1-230ENST00000561266 NEK3P51956 506 aa14.07□□□□□ -0.16
TPM1-230ENST00000561266 CCZ1BP86790 482 aa14.07□□□□□ -0.16
TPM1-230ENST00000561266 CCZ1P86791 482 aaPredicted RBP14.07□□□□□ -0.16
TPM1-230ENST00000561266 SEMG2Q02383 582 aa14.07□□□□□ -0.16
TPM1-230ENST00000561266 LMNB2Q03252 620 aa14.07□□□□□ -0.16
TPM1-230ENST00000561266 TMCO4Q5TGY1 634 aa14.07□□□□□ -0.16
TPM1-230ENST00000561266 STPG1Q5TH74 334 aa14.07□□□□□ -0.16
TPM1-230ENST00000561266 AADACL2Q6P093 401 aa14.07□□□□□ -0.16
TPM1-230ENST00000561266 KDM7AQ6ZMT4 941 aa14.07□□□□□ -0.16
TPM1-230ENST00000561266 SPOCD1Q6ZMY3 1216 aa14.07□□□□□ -0.16
TPM1-230ENST00000561266 DAAM2Q86T65 1068 aa14.07□□□□□ -0.16
TPM1-230ENST00000561266 KIAA1328Q86T90 577 aa14.07□□□□□ -0.16
TPM1-230ENST00000561266 MAP7D3Q8IWC1 876 aa14.07□□□□□ -0.16
TPM1-230ENST00000561266 ATPAF2Q8N5M1 289 aa14.07□□□□□ -0.16
TPM1-230ENST00000561266 PSKH2Q96QS6 385 aa14.07□□□□□ -0.16
TPM1-230ENST00000561266 CPEB1Q9BZB8 566 aaKnown RBP14.07□□□□□ -0.16
TPM1-230ENST00000561266 IL21RQ9HBE5 538 aa14.07□□□□□ -0.16
TPM1-230ENST00000561266 TDRD6O60522 2096 aaKnown RBP14.06□□□□□ -0.16
TPM1-230ENST00000561266 A0A1W2PQU0 124 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 A0A1W2PR77 199 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 MACROD2A1Z1Q3 448 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 ZNF487B1APH4 448 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 PSTPIP1O43586 416 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 PECAM1P16284 738 aaPredicted RBP14.06□□□□□ -0.16
TPM1-230ENST00000561266 PRLRP16471 622 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 SERPINB6P35237 376 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 MAPK8P45983 427 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 CSNK1DP48730 415 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 PEX5P50542 639 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 DYNLT1P63172 113 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 SFSWAPQ12872 951 aaKnown RBP14.06□□□□□ -0.16
TPM1-230ENST00000561266 GRIK2Q13002 908 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 PTPRRQ15256 657 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 ZNF284Q2VY69 593 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 TRIM69Q86WT6 500 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 RFX6Q8HWS3 928 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 LRRC8AQ8IWT6 810 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 KATNAL2Q8IYT4 538 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 TEX26Q8N6G2 289 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 CEP76Q8TAP6 659 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 MAML1Q92585 1016 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 ALG3Q92685 438 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 LRIG1Q96JA1 1093 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 ZNF599Q96NL3 588 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 LGMNQ99538 433 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 MYOCQ99972 504 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 CINPQ9BW66 212 aaPredicted RBP14.06□□□□□ -0.16
TPM1-230ENST00000561266 SUV39H2Q9H5I1 410 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 FZD3Q9NPG1 666 aa14.06□□□□□ -0.16
TPM1-230ENST00000561266 DDX56Q9NY93 547 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms