RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, human

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSME1-208	ENST00000561059	ABCG4	Q9H172	646 aa		13.6	□□□□□ -0.23
PSME1-208	ENST00000561059	GPR27	Q9NS67	375 aa		13.6	□□□□□ -0.23
PSME1-208	ENST00000561059	SEPT11	Q9NVA2	429 aa	Known RBP	13.6	□□□□□ -0.23
PSME1-208	ENST00000561059	TMEM248	Q9NWD8	314 aa		13.6	□□□□□ -0.23
PSME1-208	ENST00000561059	NEMP2	A6NFY4	417 aa		13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	MUSK	O15146	869 aa		13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	INSIG1	O15503	277 aa		13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	AQP9	O43315	295 aa		13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	AP1G1	O43747	822 aa		13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	GCAT	O75600	419 aa		13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	C1QL1	O75973	258 aa		13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	TMCC1	O94876	653 aa		13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	CELA2B	P08218	269 aa	Predicted RBP	13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	KRT3	P12035	628 aa		13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	EEF1G	P26641	437 aa	Known RBP	13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	ACTN2	P35609	894 aa		13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	IGFALS	P35858	605 aa		13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	RABIF	P47224	123 aa		13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	JAM2	P57087	298 aa		13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	POLD3	Q15054	466 aa	Predicted RBP	13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	SCYL2	Q6P3W7	929 aa		13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	ARC	Q7LC44	396 aa		13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	EFL1	Q7Z2Z2	1120 aa	Known RBP	13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	OR2AP1	Q8NGE2	309 aa		13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	SLC39A7	Q92504	469 aa		13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	ISG20	Q96AZ6	181 aa	Known RBP	13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	UBL7	Q96S82	380 aa	Predicted RBP	13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	WRAP53	Q9BUR4	548 aa	Known RBP	13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	NOL6	Q9H6R4	1146 aa	Known RBP	13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	SYNDIG1	Q9H7V2	258 aa		13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	MBNL1	Q9NR56	388 aa	Known RBP	13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	HPCAL4	Q9UM19	191 aa		13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	COQ6	Q9Y2Z9	468 aa		13.59	□□□□□ -0.23
PSME1-208	ENST00000561059	TENM4	Q6N022	2769 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	TRPM6	Q9BX84	2022 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059		A0A1W2PNU3	283 aa	Predicted RBP	13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	TSPAN6	O43657	245 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	PRKCG	P05129	697 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	MAPKAPK2	P49137	400 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	ADK	P55263	362 aa	Known RBP	13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	PFN3	P60673	137 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	SNRPD1	P62314	119 aa	Known RBP	13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	NRG1	Q02297	640 aa	Predicted RBP	13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	SYCP1	Q15431	976 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	C3orf38	Q5JPI3	329 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	PERM1	Q5SV97	790 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	CDKAL1	Q5VV42	579 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	SMYD5	Q6GMV2	418 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	FOXR1	Q6PIV2	292 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	WDR59	Q6PJI9	974 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	GDPD4	Q6W3E5	623 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	TTC7B	Q86TV6	843 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	ZNF677	Q86XU0	584 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	DCP2	Q8IU60	420 aa	Known RBP	13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	IFT43	Q96FT9	208 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	HMCES	Q96FZ2	354 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	DEPDC7	Q96QD5	511 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	SELENOO	Q9BVL4	669 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	MAGEH1	Q9H213	219 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	CPNE5	Q9HCH3	593 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	FANCL	Q9NW38	375 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	ADAM22	Q9P0K1	906 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	APOBEC3B	Q9UH17	382 aa	Known RBP	13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	ZNF462	Q96JM2	2506 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059	DOCK4	Q8N1I0	1966 aa		13.58	□□□□□ -0.24
PSME1-208	ENST00000561059		H3BM21	787 aa		13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	CCP110	O43303	1012 aa		13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	KDELR3	O43731	214 aa		13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	CREB3	O43889	395 aa		13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	PIGN	O95427	931 aa		13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	POP4	O95707	220 aa	Known RBP	13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	GSR	P00390	522 aa		13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	UNG	P13051	313 aa	Predicted RBP	13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	TIMP2	P16035	220 aa		13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	GPD1	P21695	349 aa		13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	EPHB2	P29323	1055 aa		13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	ETFB	P38117	255 aa		13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	STAT1	P42224	750 aa		13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	PTPN9	P43378	593 aa		13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	NSF	P46459	744 aa	Known RBP	13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	DUSP3	P51452	185 aa	Predicted RBP	13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	THOP1	P52888	689 aa		13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	RHOA	P61586	193 aa		13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	CLEC16A	Q2KHT3	1053 aa		13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	KLHL40	Q2TBA0	621 aa		13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	PRRT3	Q5FWE3	981 aa		13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	FKBP15	Q5T1M5	1219 aa		13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	ZCCHC8	Q6NZY4	707 aa	Known RBP	13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	STRADA	Q7RTN6	431 aa		13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	SLFN11	Q7Z7L1	901 aa		13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	CACTIN-AS1	Q8N1I8	211 aa		13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	FAM181A	Q8N9Y4	354 aa		13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	CENPI	Q92674	756 aa	Predicted RBP	13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	CENPT	Q96BT3	561 aa		13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	ATXN7L3B	Q96GX2	97 aa		13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	LENG8	Q96PV6	779 aa	Predicted RBP	13.57	□□□□□ -0.24
PSME1-208	ENST00000561059	LRRC61	Q9BV99	259 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms