RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 DNAAF5Q86Y56 855 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 CACTIN-AS1Q8N1I8 211 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 OR4C6Q8NH72 309 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 BTN2A2Q8WVV5 523 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 MYOCQ99972 504 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 CPEB1Q9BZB8 566 aaKnown RBP14.29□□□□□ -0.12
TPM1-223ENST00000560445 UBA2Q9UBT2 640 aaPredicted RBP14.29□□□□□ -0.12
TPM1-223ENST00000560445 AP4E1Q9UPM8 1137 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 NEU3Q9UQ49 428 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 ACACAQ13085 2346 aa14.29□□□□□ -0.12
TPM1-223ENST00000560445 A0A1B0GTH6 734 aa14.28□□□□□ -0.12
TPM1-223ENST00000560445 GOLGA6L19H0YKK7 550 aa14.28□□□□□ -0.12
TPM1-223ENST00000560445 GJB6O95452 261 aa14.28□□□□□ -0.12
TPM1-223ENST00000560445 UGT2B4P06133 528 aa14.28□□□□□ -0.12
TPM1-223ENST00000560445 ACP1P24666 158 aa14.28□□□□□ -0.12
TPM1-223ENST00000560445 NFKBIAP25963 317 aa14.28□□□□□ -0.12
TPM1-223ENST00000560445 ACADVLP49748 655 aa14.28□□□□□ -0.12
TPM1-223ENST00000560445 THOP1P52888 689 aa14.28□□□□□ -0.12
TPM1-223ENST00000560445 GOLGA4Q13439 2230 aaKnown RBP14.28□□□□□ -0.12
TPM1-223ENST00000560445 SEL1L3Q68CR1 1132 aa14.28□□□□□ -0.12
TPM1-223ENST00000560445 ERAP2Q6P179 960 aa14.28□□□□□ -0.12
TPM1-223ENST00000560445 DHRS13Q6UX07 377 aa14.28□□□□□ -0.12
TPM1-223ENST00000560445 Q6ZSR6 202 aa14.28□□□□□ -0.12
TPM1-223ENST00000560445 LZTR1Q8N653 840 aa14.28□□□□□ -0.12
TPM1-223ENST00000560445 PAF1Q8N7H5 531 aa14.28□□□□□ -0.12
TPM1-223ENST00000560445 OR13H1Q8NG92 308 aa14.28□□□□□ -0.12
TPM1-223ENST00000560445 ATL2Q8NHH9 583 aa14.28□□□□□ -0.12
TPM1-223ENST00000560445 CHD6Q8TD26 2715 aa14.28□□□□□ -0.12
TPM1-223ENST00000560445 CXorf40AQ8TE69 158 aa14.28□□□□□ -0.12
TPM1-223ENST00000560445 BAP1Q92560 729 aa14.28□□□□□ -0.12
TPM1-223ENST00000560445 TUBGCP5Q96RT8 1024 aa14.28□□□□□ -0.12
TPM1-223ENST00000560445 C1QTNF2Q9BXJ5 285 aa14.28□□□□□ -0.12
TPM1-223ENST00000560445 NLGN3Q9NZ94 848 aa14.28□□□□□ -0.12
TPM1-223ENST00000560445 PKD1L2Q7Z442 2459 aa14.27□□□□□ -0.12
TPM1-223ENST00000560445 KNTC1P50748 2209 aa14.27□□□□□ -0.12
TPM1-223ENST00000560445 AKAP13Q12802 2813 aa14.27□□□□□ -0.12
TPM1-223ENST00000560445 DGKAP23743 735 aa14.27□□□□□ -0.13
TPM1-223ENST00000560445 YPEL5P62699 121 aa14.27□□□□□ -0.13
TPM1-223ENST00000560445 RFTN1Q14699 578 aaPredicted RBP14.27□□□□□ -0.13
TPM1-223ENST00000560445 ARTNQ5T4W7 220 aa14.27□□□□□ -0.13
TPM1-223ENST00000560445 ERMARDQ5T6L9 678 aa14.27□□□□□ -0.13
TPM1-223ENST00000560445 BRAT1Q6PJG6 821 aa14.27□□□□□ -0.13
TPM1-223ENST00000560445 GCNT7Q6ZNI0 430 aa14.27□□□□□ -0.13
TPM1-223ENST00000560445 TTC7BQ86TV6 843 aa14.27□□□□□ -0.13
TPM1-223ENST00000560445 OR6K2Q8NGY2 324 aa14.27□□□□□ -0.13
TPM1-223ENST00000560445 TSC1Q92574 1164 aa14.27□□□□□ -0.13
TPM1-223ENST00000560445 SYN2Q92777 582 aaPredicted RBP14.27□□□□□ -0.13
TPM1-223ENST00000560445 KLK6Q92876 244 aa14.27□□□□□ -0.13
TPM1-223ENST00000560445 GLMNQ92990 594 aa14.27□□□□□ -0.13
TPM1-223ENST00000560445 ZNF653Q96CK0 615 aa14.27□□□□□ -0.13
TPM1-223ENST00000560445 HMCESQ96FZ2 354 aa14.27□□□□□ -0.13
TPM1-223ENST00000560445 TBATAQ96M53 351 aa14.27□□□□□ -0.13
TPM1-223ENST00000560445 ZNF641Q96N77 438 aaPredicted RBP14.27□□□□□ -0.13
TPM1-223ENST00000560445 KLHL32Q96NJ5 620 aa14.27□□□□□ -0.13
TPM1-223ENST00000560445 SYT11Q9BT88 431 aa14.27□□□□□ -0.13
TPM1-223ENST00000560445 DHX35Q9H5Z1 703 aaKnown RBP14.27□□□□□ -0.13
TPM1-223ENST00000560445 HAUS4Q9H6D7 363 aa14.27□□□□□ -0.13
TPM1-223ENST00000560445 ZWILCHQ9H900 591 aa14.27□□□□□ -0.13
TPM1-223ENST00000560445 NDFIP2Q9NV92 336 aa14.27□□□□□ -0.13
TPM1-223ENST00000560445 HAUS2Q9NVX0 235 aa14.27□□□□□ -0.13
TPM1-223ENST00000560445 DNAJC28Q9NX36 388 aa14.27□□□□□ -0.13
TPM1-223ENST00000560445 CNOT8Q9UFF9 292 aaKnown RBP14.27□□□□□ -0.13
TPM1-223ENST00000560445 ZFR2Q9UPR6 939 aaKnown RBP14.27□□□□□ -0.13
TPM1-223ENST00000560445 CSNK1G3Q9Y6M4 447 aa14.27□□□□□ -0.13
TPM1-223ENST00000560445 SPTY2D1-AS1A0A0U1RR47 76 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 A0A1W2PQJ5 194 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 TMEM191CA6NGB0 347 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 TMEM110-MUSTN1A8MSY1 372 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 TMCO5BA8MYB1 307 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 H3BRJ5 948 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 TEX33O43247 280 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 PIAS2O75928 621 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 TM7SF2O76062 418 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 CD160O95971 181 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 PAK4O96013 591 aaPredicted RBP14.26□□□□□ -0.13
TPM1-223ENST00000560445 FTLP02792 175 aaPredicted RBP14.26□□□□□ -0.13
TPM1-223ENST00000560445 GP1BAP07359 652 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 NME1P15531 152 aaKnown RBP14.26□□□□□ -0.13
TPM1-223ENST00000560445 SERPINA4P29622 427 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 PCK1P35558 622 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 ARL4AP40617 200 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 HCAR3P49019 387 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 RPIAP49247 311 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 BLKP51451 505 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 RENBPP51606 427 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 POLR2LP62875 67 aaKnown RBP14.26□□□□□ -0.13
TPM1-223ENST00000560445 BNIP3Q12983 259 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 KLHL40Q2TBA0 621 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 PROX2Q3B8N5 592 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 RAB6CQ53S08 254 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 TDRD12Q587J7 1177 aaKnown RBP14.26□□□□□ -0.13
TPM1-223ENST00000560445 KANSL1Q7Z3B3 1105 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 PYROXD2Q8N2H3 581 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 BBS5Q8N3I7 341 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 RAB6CQ9H0N0 254 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 ATP13A3Q9H7F0 1226 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 SP110Q9HB58 689 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 FZD3Q9NPG1 666 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 LCMT1Q9UIC8 334 aa14.26□□□□□ -0.13
TPM1-223ENST00000560445 A0A1W2PQ67 120 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms