RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 MEA1Q16626 185 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 ALG11Q2TAA5 492 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 BEND7Q8N7W2 519 aaPredicted RBP13.58□□□□□ -0.24
TRAF3-208ENST00000560371 FAIM2Q9BWQ8 316 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 SEMA4BQ9NPR2 832 aaPredicted RBP13.58□□□□□ -0.24
TRAF3-208ENST00000560371 ARHGEF3Q9NR81 526 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 DCXO43602 365 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 LTA4HP09960 611 aaKnown RBP13.58□□□□□ -0.24
TRAF3-208ENST00000560371 L1RE1Q9UN81 338 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 PRMT2P55345 433 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 GRM3Q14832 879 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 TMEM26Q6ZUK4 368 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 PARGQ86W56 976 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 KLHL23Q8NBE8 558 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 SIKE1Q9BRV8 207 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 FUCA2Q9BTY2 467 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 FUT8Q9BYC5 575 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 MLYCDO95822 493 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 ABRQ12979 859 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 FAM187BQ17R55 369 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 AGMOQ6ZNB7 445 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 HDDC2Q7Z4H3 204 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 PHF13Q86YI8 300 aaPredicted RBP13.58□□□□□ -0.24
TRAF3-208ENST00000560371 MFSD14AQ96MC6 490 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 FERD3LQ96RJ6 166 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 MCCC1Q96RQ3 725 aaPredicted RBP13.58□□□□□ -0.24
TRAF3-208ENST00000560371 AP4S1Q9Y587 144 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 KCNE2Q9Y6J6 123 aa13.58□□□□□ -0.24
TRAF3-208ENST00000560371 GRM6O15303 877 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 NFATC1O95644 943 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 HNF4AP41235 474 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 CLCN5P51795 746 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 RGS1Q08116 209 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 KPNB1Q14974 876 aaKnown RBP13.57□□□□□ -0.24
TRAF3-208ENST00000560371 TSHZ1Q6ZSZ6 1077 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 OR10G6Q8NH81 332 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 UGT2B28Q9BY64 529 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 MYH1P12882 1939 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 MON2Q7Z3U7 1717 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 ERN1O75460 977 aaKnown RBP13.57□□□□□ -0.24
TRAF3-208ENST00000560371 INHAP05111 366 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 CYP1A2P05177 515 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 EVX2Q03828 476 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 KLHL35Q6PF15 583 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 BHLHB9Q6PI77 547 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 OR6K2Q8NGY2 324 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 NINJ2Q9NZG7 142 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 PCDHA11Q9Y5I1 949 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 ATG7O95352 703 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 NTRK1P04629 796 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 CAPN1P07384 714 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 EPORP19235 508 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 ABCG1P45844 678 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 NAGLUP54802 743 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 IL5RAQ01344 420 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 GALNT3Q14435 633 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 PPP1R15BQ5SWA1 713 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 ZCCHC23Q6ZST2 131 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 SH3RF1Q7Z6J0 888 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 IL1RAPL1Q9NZN1 696 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 A0A1W2PQH9 124 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 H0Y858 1186 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 MPPE1Q53F39 396 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 FUT10Q6P4F1 479 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 ADAMTSL2Q86TH1 951 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 RBFAQ8N0V3 343 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 BSNDQ8WZ55 320 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 EPB41L4BQ9H329 900 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 COL14A1Q05707 1796 aaKnown RBP13.57□□□□□ -0.24
TRAF3-208ENST00000560371 CLDN11O75508 207 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 FGF1P05230 155 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 ANXA6P08133 673 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 NQO1P15559 274 aaKnown RBP13.57□□□□□ -0.24
TRAF3-208ENST00000560371 CORO1AP31146 461 aaKnown RBP13.57□□□□□ -0.24
TRAF3-208ENST00000560371 CLK3P49761 638 aaKnown RBP13.57□□□□□ -0.24
TRAF3-208ENST00000560371 WDR36Q8NI36 951 aaKnown RBP13.57□□□□□ -0.24
TRAF3-208ENST00000560371 HDAC10Q969S8 669 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 COPS8Q99627 209 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 SLC39A8Q9C0K1 460 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 BATF3Q9NR55 127 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 C15orf38-AP3S2A0A0A6YYH1 394 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 SMIM28A0A1B0GU29 152 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 NEK3P51956 506 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 TRMT5Q32P41 509 aaKnown RBP13.57□□□□□ -0.24
TRAF3-208ENST00000560371 ARPINQ7Z6K5 226 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 PTPRJQ12913 1337 aa13.57□□□□□ -0.24
TRAF3-208ENST00000560371 CHURC1-FNTBB4DL54 471 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 CA12O43570 354 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 PIGNO95427 931 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 ETS1P14921 441 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 NUP107P57740 925 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 FMO1Q01740 532 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 EFCAB3Q8N7B9 438 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 ATAD1Q8NBU5 361 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 ARNTL2Q8WYA1 636 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 TMPRSS4Q9NRS4 437 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 ZNF711Q9Y462 761 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 OR10H1Q9Y4A9 318 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 ADGRA3Q8IWK6 1321 aa13.56□□□□□ -0.24
TRAF3-208ENST00000560371 LRRC10BA6NIK2 292 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms