RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 ZNF599Q96NL3 588 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 MRPL57Q9BQC6 102 aaKnown RBP8.18□□□□□ -1.1
SMAD3-212ENST00000559937 TMEM175Q9BSA9 504 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 MRPL9Q9BYD2 267 aaKnown RBP8.18□□□□□ -1.1
SMAD3-212ENST00000559937 MRPL46Q9H2W6 279 aaKnown RBP8.18□□□□□ -1.1
SMAD3-212ENST00000559937 CAB39LQ9H9S4 337 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 TRPC7Q9HCX4 862 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 PNPOQ9NVS9 261 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 GMIPQ9P107 970 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 ANGPTL2Q9UKU9 493 aa8.18□□□□□ -1.1
SMAD3-212ENST00000559937 MAGED2Q9UNF1 606 aaPredicted RBP8.18□□□□□ -1.1
SMAD3-212ENST00000559937 ANAPC1Q9H1A4 1944 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 MKI67P46013 3256 aaKnown RBP8.17□□□□□ -1.1
SMAD3-212ENST00000559937 GOLGA8QA0A0J9YX86 632 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 MTMR11A4FU01 709 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 GOLGA8OA6NCC3 632 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.17□□□□□ -1.1
SMAD3-212ENST00000559937 F8W810 466 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 GOLGA8NF8WBI6 632 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 ARVCFO00192 962 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 MATN2O00339 956 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 HDAC3O15379 428 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 TBC1D4O60343 1298 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 CCNT2O60583 730 aaKnown RBP8.17□□□□□ -1.1
SMAD3-212ENST00000559937 ENTPD5O75356 428 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 EPOP01588 193 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 MYCNP04198 464 aaPredicted RBP8.17□□□□□ -1.1
SMAD3-212ENST00000559937 FGF1P05230 155 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 SBK3P0C264 359 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 ZDHHC11BP0C7U3 371 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 HAPLN1P10915 354 aaPredicted RBP8.17□□□□□ -1.1
SMAD3-212ENST00000559937 ELNP15502 786 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 ACADSP16219 412 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 ATP6V1C1P21283 382 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 IBSPP21815 317 aaPredicted RBP8.17□□□□□ -1.1
SMAD3-212ENST00000559937 GABRB3P28472 473 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 ARRB2P32121 409 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 SLC1A2P43004 574 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 LEPRP48357 1165 aaKnown RBP8.17□□□□□ -1.1
SMAD3-212ENST00000559937 PGFP49763 221 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 RPL14P50914 215 aaKnown RBP8.17□□□□□ -1.1
SMAD3-212ENST00000559937 SLC12A2P55011 1212 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 SATB1Q01826 763 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 ACVR1Q04771 509 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 KDSRQ06136 332 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 SLC34A1Q06495 639 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 EFEMP1Q12805 493 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 GPR17Q13304 367 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 BFSP2Q13515 415 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 SERINC3Q13530 473 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 HERC3Q15034 1050 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 RCN1Q15293 331 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 TAF11Q15544 211 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 DLG2Q15700 870 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 CCDC6Q16204 474 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 CNGA3Q16281 694 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 DDR2Q16832 855 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 KHDC1Q4VXA5 237 aaKnown RBP8.17□□□□□ -1.1
SMAD3-212ENST00000559937 SH2D4BQ5SQS7 431 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 TMCO4Q5TGY1 634 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 SNX30Q5VWJ9 437 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 ALG1LQ6GMV1 187 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 NEPROQ6NW34 567 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 PGM2L1Q6PCE3 622 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 NAPRTQ6XQN6 538 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 ATG14Q6ZNE5 492 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 LRRC8DQ7L1W4 858 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 PIWIL4Q7Z3Z4 852 aaKnown RBP8.17□□□□□ -1.1
SMAD3-212ENST00000559937 ADGRG6Q86SQ4 1221 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 MYLK4Q86YV6 388 aaPredicted RBP8.17□□□□□ -1.1
SMAD3-212ENST00000559937 SLC41A1Q8IVJ1 513 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 ULK2Q8IYT8 1036 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 CENPLQ8N0S6 344 aaPredicted RBP8.17□□□□□ -1.1
SMAD3-212ENST00000559937 TMEM151AQ8N4L1 468 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 CPSF7Q8N684 471 aaKnown RBP8.17□□□□□ -1.1
SMAD3-212ENST00000559937 ZNF781Q8N8C0 355 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 TDRD5Q8NAT2 981 aaKnown RBP8.17□□□□□ -1.1
SMAD3-212ENST00000559937 ACTRT2Q8TDY3 377 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 ZNF296Q8WUU4 475 aaPredicted RBP8.17□□□□□ -1.1
SMAD3-212ENST00000559937 KCTD4Q8WVF5 259 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 SCG3Q8WXD2 468 aaKnown RBP8.17□□□□□ -1.1
SMAD3-212ENST00000559937 OVCA2Q8WZ82 227 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 JADE3Q92613 823 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 ATXN7L3BQ96GX2 97 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 ELMO2Q96JJ3 720 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 FEM1CQ96JP0 617 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 FAR2Q96K12 515 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 SCYL1Q96KG9 808 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 CNDP1Q96KN2 507 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 FAM161BQ96MY7 647 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 ZNF570Q96NI8 536 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 GPR78Q96P69 363 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 PGLYRP2Q96PD5 576 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 RTKNQ9BST9 563 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 TTLL2Q9BWV7 592 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 PPP1R12CQ9BZL4 782 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 MFSD1Q9H3U5 465 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 COG4Q9H9E3 785 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 SP110Q9HB58 689 aa8.17□□□□□ -1.1
SMAD3-212ENST00000559937 NT5MQ9NPB1 228 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms