RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 MGME1Q9BQP7 344 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 IER2Q9BTL4 223 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 POLR1EQ9GZS1 481 aaKnown RBP12.59□□□□□ -0.39
GABPB1-208ENST00000558970 BRD8Q9H0E9 1235 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 DDX47Q9H0S4 455 aaKnown RBP12.59□□□□□ -0.39
GABPB1-208ENST00000558970 RSPH9Q9H1X1 276 aaPredicted RBP12.59□□□□□ -0.39
GABPB1-208ENST00000558970 NOD2Q9HC29 1040 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 CD248Q9HCU0 757 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 RSPH14Q9UHP6 348 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 TTC7AQ9ULT0 858 aaPredicted RBP12.59□□□□□ -0.39
GABPB1-208ENST00000558970 CYP8B1Q9UNU6 501 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 PCDHGC4Q9Y5F7 938 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 WASF2Q9Y6W5 498 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 GOLGA6L10A0A0M3HER8 536 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 A0A1W2PP55 124 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 BCLAF3A2AJT9 711 aaKnown RBP12.58□□□□□ -0.4
GABPB1-208ENST00000558970 C1QTNF3-AMACRE9PGA6 284 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 KIF2AO00139 706 aaPredicted RBP12.58□□□□□ -0.4
GABPB1-208ENST00000558970 RNASEH2AO75792 299 aaKnown RBP12.58□□□□□ -0.4
GABPB1-208ENST00000558970 STK10O94804 968 aaKnown RBP12.58□□□□□ -0.4
GABPB1-208ENST00000558970 PRLRP16471 622 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 SLC8A1P32418 973 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 CD86P42081 329 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 RAD51Q06609 339 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 ZNF33AQ06730 810 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 NIPAL4Q0D2K0 466 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 ANGPT1Q15389 498 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 TRIP13Q15645 432 aaPredicted RBP12.58□□□□□ -0.4
GABPB1-208ENST00000558970 OASLQ15646 514 aaKnown RBP12.58□□□□□ -0.4
GABPB1-208ENST00000558970 CCNG2Q16589 344 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 LRRK1Q38SD2 2015 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 TEX44Q53QW1 395 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 DNTTIP2Q5QJE6 756 aaKnown RBP12.58□□□□□ -0.4
GABPB1-208ENST00000558970 ANKRD20A2Q5SQ80 823 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 CFAP58Q5T655 872 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 ANKRD20A1Q5TYW2 823 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 ANKRD20A3Q5VUR7 823 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 TTC27Q6P3X3 843 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 ARHGEF18Q6ZSZ5 1173 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 DSG4Q86SJ6 1040 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 MAML2Q8IZL2 1156 aaPredicted RBP12.58□□□□□ -0.4
GABPB1-208ENST00000558970 FAM160A2Q8N612 972 aaPredicted RBP12.58□□□□□ -0.4
GABPB1-208ENST00000558970 FRMD1Q8N878 549 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 GLIS1Q8NBF1 620 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 SPATA22Q8NHS9 363 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 ARRDC3Q96B67 414 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 NSMCE3Q96MG7 304 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 KLHL32Q96NJ5 620 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 PHOX2BQ99453 314 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 USP29Q9HBJ7 922 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 PRMT8Q9NR22 394 aaPredicted RBP12.58□□□□□ -0.4
GABPB1-208ENST00000558970 SERGEFQ9UGK8 458 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 PLXND1Q9Y4D7 1925 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 CFAP54Q96N23 3096 aa12.58□□□□□ -0.4
GABPB1-208ENST00000558970 USP34Q70CQ2 3546 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 CXorf51AA0A1B0GTR3 108 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 PRR23AA6NEV1 266 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 ESPNB1AK53 854 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 MTSS1O43312 755 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 PHF2O75151 1096 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 POP4O95707 220 aaKnown RBP12.57□□□□□ -0.4
GABPB1-208ENST00000558970 MT-CYBP00156 380 aaPredicted RBP12.57□□□□□ -0.4
GABPB1-208ENST00000558970 PRNPP04156 253 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 PRKCGP05129 697 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 ZSCAN5DPP0CG00 497 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 PSMB4P28070 264 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 CD68P34810 354 aaPredicted RBP12.57□□□□□ -0.4
GABPB1-208ENST00000558970 HSPA9P38646 679 aaKnown RBP12.57□□□□□ -0.4
GABPB1-208ENST00000558970 VPS41P49754 854 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 SEMG2Q02383 582 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 BCL2L1Q07817 233 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 C2orf54Q08AI8 447 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 CNTN1Q12860 1018 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 SRSF5Q13243 272 aaKnown RBP12.57□□□□□ -0.4
GABPB1-208ENST00000558970 NCEH1Q6PIU2 408 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 CCDC137Q6PK04 289 aaKnown RBP12.57□□□□□ -0.4
GABPB1-208ENST00000558970 GDPD4Q6W3E5 623 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.57□□□□□ -0.4
GABPB1-208ENST00000558970 HDDC3Q8N4P3 179 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 AADATQ8N5Z0 425 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 CCDC89Q8N998 374 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 KIF18AQ8NI77 898 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 NKD2Q969F2 451 aaPredicted RBP12.57□□□□□ -0.4
GABPB1-208ENST00000558970 TEKT5Q96M29 485 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 NUDCD1Q96RS6 583 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 OMDQ99983 421 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 ATP13A3Q9H7F0 1226 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 GLOD4Q9HC38 313 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 DYRK4Q9NR20 520 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 EBF1Q9UH73 591 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 PPM1HQ9ULR3 514 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 ATP8A1Q9Y2Q0 1164 aa12.57□□□□□ -0.4
GABPB1-208ENST00000558970 THADAQ6YHU6 1953 aa12.56□□□□□ -0.4
GABPB1-208ENST00000558970 CFAP69A5D8W1 941 aa12.56□□□□□ -0.4
GABPB1-208ENST00000558970 FAM47DPA6NHR8 397 aa12.56□□□□□ -0.4
GABPB1-208ENST00000558970 PROB1E7EW31 1015 aa12.56□□□□□ -0.4
GABPB1-208ENST00000558970 AXIN1O15169 862 aa12.56□□□□□ -0.4
GABPB1-208ENST00000558970 ALOX15BO15296 676 aa12.56□□□□□ -0.4
GABPB1-208ENST00000558970 PMPCBO75439 489 aa12.56□□□□□ -0.4
GABPB1-208ENST00000558970 ADH1BP00325 375 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms