RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 ETNK2Q9NVF9 386 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 TOR4AQ9NXH8 423 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 CWC15Q9P013 229 aaKnown RBP12.7□□□□□ -0.38
SMAD3-208ENST00000558827 LHX3Q9UBR4 397 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 UBA2Q9UBT2 640 aaPredicted RBP12.7□□□□□ -0.38
SMAD3-208ENST00000558827 DMTF1Q9Y222 760 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 APOBEC2Q9Y235 224 aaKnown RBP12.7□□□□□ -0.38
SMAD3-208ENST00000558827 SCINQ9Y6U3 715 aa12.7□□□□□ -0.38
SMAD3-208ENST00000558827 A0A1W2PQJ5 194 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 POM121BA6NF01 834 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 FGF10O15520 208 aaPredicted RBP12.69□□□□□ -0.38
SMAD3-208ENST00000558827 SPINT1O43278 529 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 PCDHGA12O60330 932 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 MMP20O60882 483 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 MYF5P13349 255 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 TIMP2P16035 220 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 PTMSP20962 102 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 HNRNPA2B1P22626 353 aaKnown RBP12.69□□□□□ -0.38
SMAD3-208ENST00000558827 RGRP47804 291 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 AIF1P55008 147 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 GEMIN4P57678 1058 aaKnown RBP12.69□□□□□ -0.38
SMAD3-208ENST00000558827 PARP15Q460N3 678 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 DHRS13Q6UX07 377 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 GCNT7Q6ZNI0 430 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 Q6ZSR6 202 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 RFX8Q6ZV50 586 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 PTAR1Q7Z6K3 402 aaPredicted RBP12.69□□□□□ -0.38
SMAD3-208ENST00000558827 ARHGAP12Q8IWW6 846 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 NPWQ8N729 165 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 BAHD1Q8TBE0 780 aaPredicted RBP12.69□□□□□ -0.38
SMAD3-208ENST00000558827 SAP25Q8TEE9 199 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 CNDP2Q96KP4 475 aaKnown RBP12.69□□□□□ -0.38
SMAD3-208ENST00000558827 CDC6Q99741 560 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 NCAPGQ9BPX3 1015 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 WRAP53Q9BUR4 548 aaKnown RBP12.69□□□□□ -0.38
SMAD3-208ENST00000558827 TSPY26PQ9H489 355 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 RETREG1Q9H6L5 497 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 MRPL47Q9HD33 250 aaKnown RBP12.69□□□□□ -0.38
SMAD3-208ENST00000558827 UCKL1Q9NWZ5 548 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 FTSJ1Q9UET6 329 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 ANAPC7Q9UJX3 599 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 COQ6Q9Y2Z9 468 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 KNTC1P50748 2209 aa12.69□□□□□ -0.38
SMAD3-208ENST00000558827 ZSCAN5CA6NGD5 496 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-208ENST00000558827 ARHGAP42A6NI28 874 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 TMEM110-MUSTN1A8MSY1 372 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 FFAR2O15552 330 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 PRAMEF11O60813 436 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 LDOC1O95751 146 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-208ENST00000558827 PROS1P07225 676 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 MYBL1P10243 752 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 RARAP10276 462 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 EPHA8P29322 1005 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-208ENST00000558827 ARRB1P49407 418 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-208ENST00000558827 RPS21P63220 83 aaKnown RBP12.68□□□□□ -0.38
SMAD3-208ENST00000558827 RAD51Q06609 339 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 SGCGQ13326 291 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 SKOR2Q2VWA4 1001 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-208ENST00000558827 ATP13A4Q4VNC1 1196 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 TMEM259Q4ZIN3 620 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 NEK5Q6P3R8 708 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 ALKBH5Q6P6C2 394 aaKnown RBP12.68□□□□□ -0.38
SMAD3-208ENST00000558827 VPS36Q86VN1 386 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 CAMK1DQ8IU85 385 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 PAF1Q8N7H5 531 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 TMEM145Q8NBT3 493 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 TSEN2Q8NCE0 465 aaKnown RBP12.68□□□□□ -0.38
SMAD3-208ENST00000558827 ADAMTS14Q8WXS8 1223 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 SYN2Q92777 582 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-208ENST00000558827 GATA6Q92908 595 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 TRIM11Q96F44 468 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 BMFQ96LC9 184 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 PACSIN1Q9BY11 444 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 SP110Q9HB58 689 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 PDFQ9HBH1 243 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 KLHL11Q9NVR0 708 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 PLXNB3Q9ULL4 1909 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 SPEGQ15772 3267 aa12.68□□□□□ -0.38
SMAD3-208ENST00000558827 A8MX80 341 aa12.67□□□□□ -0.38
SMAD3-208ENST00000558827 H3BRJ5 948 aa12.67□□□□□ -0.38
SMAD3-208ENST00000558827 ENC1O14682 589 aa12.67□□□□□ -0.38
SMAD3-208ENST00000558827 TNFSF14O43557 240 aa12.67□□□□□ -0.38
SMAD3-208ENST00000558827 DFNA5O60443 496 aa12.67□□□□□ -0.38
SMAD3-208ENST00000558827 BUB1BO60566 1050 aaPredicted RBP12.67□□□□□ -0.38
SMAD3-208ENST00000558827 PALMO75781 387 aa12.67□□□□□ -0.38
SMAD3-208ENST00000558827 TRIM16O95361 564 aa12.67□□□□□ -0.38
SMAD3-208ENST00000558827 XPAP23025 273 aaPredicted RBP12.67□□□□□ -0.38
SMAD3-208ENST00000558827 NDST2P52849 883 aa12.67□□□□□ -0.38
SMAD3-208ENST00000558827 MMRN1Q13201 1228 aa12.67□□□□□ -0.38
SMAD3-208ENST00000558827 TCEA2Q15560 299 aa12.67□□□□□ -0.38
SMAD3-208ENST00000558827 INO80DQ53TQ3 878 aaPredicted RBP12.67□□□□□ -0.38
SMAD3-208ENST00000558827 TPRG1LQ5T0D9 272 aa12.67□□□□□ -0.38
SMAD3-208ENST00000558827 FAM182AQ5T1J6 154 aa12.67□□□□□ -0.38
SMAD3-208ENST00000558827 GLRX5Q86SX6 157 aa12.67□□□□□ -0.38
SMAD3-208ENST00000558827 PLPP6Q8IY26 295 aa12.67□□□□□ -0.38
SMAD3-208ENST00000558827 SLC22A18ASQ8N1D0 253 aa12.67□□□□□ -0.38
SMAD3-208ENST00000558827 FNIP1Q8TF40 1166 aa12.67□□□□□ -0.38
SMAD3-208ENST00000558827 LRRN4Q8WUT4 740 aa12.67□□□□□ -0.38
SMAD3-208ENST00000558827 NSMCE3Q96MG7 304 aa12.67□□□□□ -0.38
SMAD3-208ENST00000558827 TMEM121BQ9BXQ6 578 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms