RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 OR7D4Q8NG98 312 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 SHKBP1Q8TBC3 707 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 MTBPQ96DY7 904 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 SEC16BQ96JE7 1060 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 PPP1R2P1Q96PQ5 205 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 FGFR1OP2Q9NVK5 253 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 SMPD4Q9NXE4 827 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 ACTL7AQ9Y615 435 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 MAGEB16A2A368 324 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 TTC24A2A3L6 582 aaPredicted RBP13.12□□□□□ -0.31
SMAD3-207ENST00000558763 KRT38O76015 456 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 F7P08709 466 aaPredicted RBP13.12□□□□□ -0.31
SMAD3-207ENST00000558763 POU2F2P09086 479 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 ARNTP27540 789 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 NUMBP49757 651 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 MROH9Q5TGP6 573 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 CHST9Q7L1S5 443 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 RASSF3Q86WH2 238 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 ARL14EPQ8N8R7 260 aaPredicted RBP13.12□□□□□ -0.31
SMAD3-207ENST00000558763 TTC16Q8NEE8 873 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 ATP2A3Q93084 1043 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 NSMCE3Q96MG7 304 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 AGAP2Q99490 1192 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 MAGEH1Q9H213 219 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 VPS45Q9NRW7 570 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 TBC1D30Q9Y2I9 924 aa13.12□□□□□ -0.31
SMAD3-207ENST00000558763 MRPS23Q9Y3D9 190 aaKnown RBP13.12□□□□□ -0.31
SMAD3-207ENST00000558763 A0A1B0GVM2 712 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 TCAF2A6NFQ2 919 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 AP3B1O00203 1094 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 EBAG9O00559 213 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 MOSPD3O75425 235 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 CLDN11O75508 207 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 CKMP06732 381 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 VIMP08670 466 aaKnown RBP13.11□□□□□ -0.31
SMAD3-207ENST00000558763 FOSL2P15408 326 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 CEBPBP17676 345 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 GLDCP23378 1020 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 CNTFP26441 200 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 CD86P42081 329 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 IL9RQ01113 521 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 LBRQ14739 615 aaKnown RBP13.11□□□□□ -0.31
SMAD3-207ENST00000558763 CTC1Q2NKJ3 1217 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 PRSS36Q5K4E3 855 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 RABGAP1LQ5R372 815 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 GPR158Q5T848 1215 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 TEDDM1Q5T9Z0 273 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 TMCO4Q5TGY1 634 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 PKN3Q6P5Z2 889 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 CPLX4Q7Z7G2 160 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 GPR149Q86SP6 731 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 TAX1BP1Q86VP1 789 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 FAM217AQ8IXS0 508 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 LEMD2Q8NC56 503 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 ITFG1Q8TB96 612 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 PPM1EQ8WY54 764 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 CDKL2Q92772 493 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 ISL2Q96A47 359 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 GUCD1Q96NT3 240 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 SRPK1Q96SB4 655 aaKnown RBP13.11□□□□□ -0.31
SMAD3-207ENST00000558763 TREX1Q9NSU2 369 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 ZFATQ9P243 1243 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 PRKAG3Q9UGI9 489 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 GGA2Q9UJY4 613 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 PRDM4Q9UKN5 801 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 TCAF1Q9Y4C2 921 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 ANKRD36A6QL64 1941 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 BRWD1Q9NSI6 2320 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 SCAMP3O14828 347 aaKnown RBP13.11□□□□□ -0.31
SMAD3-207ENST00000558763 FGF19O95750 216 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 LATS1O95835 1130 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 TOP3BO95985 862 aaKnown RBP13.11□□□□□ -0.31
SMAD3-207ENST00000558763 ITGA2BP08514 1039 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 ATXN1LP0C7T5 689 aaKnown RBP13.11□□□□□ -0.31
SMAD3-207ENST00000558763 MBL2P11226 248 aaPredicted RBP13.11□□□□□ -0.31
SMAD3-207ENST00000558763 ALADP13716 330 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 HDCP19113 662 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 LTBRP36941 435 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 MAGEA12P43365 314 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 ARCN1P48444 511 aaKnown RBP13.11□□□□□ -0.31
SMAD3-207ENST00000558763 POU6F1Q14863 301 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 PCID2Q5JVF3 399 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 ZNF599Q96NL3 588 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 CPNE1Q99829 537 aa13.11□□□□□ -0.31
SMAD3-207ENST00000558763 ACE2Q9BYF1 805 aaPredicted RBP13.11□□□□□ -0.31
SMAD3-207ENST00000558763 MRM3Q9HC36 420 aaKnown RBP13.11□□□□□ -0.31
SMAD3-207ENST00000558763 ILVBLA1L0T0 632 aa13.1□□□□□ -0.31
SMAD3-207ENST00000558763 SNX3O60493 162 aa13.1□□□□□ -0.31
SMAD3-207ENST00000558763 HOXB8P17481 243 aaPredicted RBP13.1□□□□□ -0.31
SMAD3-207ENST00000558763 ETFBP38117 255 aa13.1□□□□□ -0.31
SMAD3-207ENST00000558763 GP5P40197 560 aa13.1□□□□□ -0.31
SMAD3-207ENST00000558763 CSRP3P50461 194 aa13.1□□□□□ -0.31
SMAD3-207ENST00000558763 DNAJC3Q13217 504 aa13.1□□□□□ -0.31
SMAD3-207ENST00000558763 CBX2Q14781 532 aaPredicted RBP13.1□□□□□ -0.31
SMAD3-207ENST00000558763 SKIV2LQ15477 1246 aaKnown RBP13.1□□□□□ -0.31
SMAD3-207ENST00000558763 ZKSCAN8Q15776 578 aaPredicted RBP13.1□□□□□ -0.31
SMAD3-207ENST00000558763 HSP90AA5PQ58FG0 334 aa13.1□□□□□ -0.31
SMAD3-207ENST00000558763 GKAP1Q5VSY0 366 aaPredicted RBP13.1□□□□□ -0.31
SMAD3-207ENST00000558763 CES5AQ6NT32 575 aa13.1□□□□□ -0.31
SMAD3-207ENST00000558763 GPR153Q6NV75 609 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms