RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 ILDR1Q86SU0 546 aaPredicted RBP11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 RIOX2Q8IUF8 465 aa11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 CBR4Q8N4T8 237 aa11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 ASCC1Q8N9N2 400 aaKnown RBP11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 TAS1R2Q8TE23 839 aa11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 PPP3R2Q96LZ3 170 aa11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 CCDC115Q96NT0 180 aa11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 MXRA8Q9BRK3 442 aa11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 PSME2Q9UL46 239 aa11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 PRMT5O14744 637 aaPredicted RBP11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 TBX1O43435 398 aa11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 PSIP1O75475 530 aaKnown RBP11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 JCHAINP01591 159 aa11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 NCAM1P13591 858 aa11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 NOS3P29474 1203 aa11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 HNMTP50135 292 aa11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 PRKCQQ04759 706 aa11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 CYP24A1Q07973 514 aa11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 TWF1Q12792 350 aa11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 IL18Q14116 193 aa11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 TTLL4Q14679 1199 aa11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 PSMD5Q16401 504 aa11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 ATF7IP2Q5U623 682 aa11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 PHC2Q8IXK0 858 aa11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 SVOPLQ8N434 492 aa11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 ENDOVQ8N8Q3 282 aaKnown RBP11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 DMRTB1Q96MA1 342 aa11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 CHMP1AQ9HD42 196 aaPredicted RBP11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 RABL2AQ9UBK7 228 aaPredicted RBP11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 GIT1Q9Y2X7 761 aa11.87□□□□□ -0.51
CSPG4P12-201ENST00000558282 SLC37A4O43826 429 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 ITGALP20701 1170 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 SUZ12Q15022 739 aaKnown RBP11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 SH3D19Q5HYK7 790 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 PJA1Q8NG27 643 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 CINPQ9BW66 212 aaPredicted RBP11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 ADGRE3Q9BY15 652 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 IL22Q9GZX6 179 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 SLC6A15Q9H2J7 730 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 XKR8Q9H6D3 395 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 MIEF1Q9NQG6 463 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 PDGFCQ9NRA1 345 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 RPS6KB2Q9UBS0 482 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 WWP2O00308 870 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 MED24O75448 989 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 FBXO21O94952 628 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 ERP29P30040 261 aaKnown RBP11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 HPCAL1P37235 193 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 ALFQ53S48 1182 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 IER5Q5VY09 327 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 OLFML2AQ68BL7 652 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 ZNF470Q6ECI4 717 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 ZNF572Q7Z3I7 529 aaPredicted RBP11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 TOR1AIP2Q8NFQ8 470 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 SEMA4DQ92854 862 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 NACC2Q96BF6 587 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 SLC47A1Q96FL8 570 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 SLC9A7Q96T83 725 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 DDIT4Q9NX09 232 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 GTF2A1LQ9UNN4 478 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 SAMD4AQ9UPU9 718 aaKnown RBP11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 POMPQ9Y244 141 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 PRR36Q9H6K5 1346 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 ZC3H4Q9UPT8 1303 aaKnown RBP11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 RPLP0P05388 317 aaKnown RBP11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 PEPDP12955 493 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 F8A1P23610 371 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 DSG3P32926 999 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 CMPK2Q5EBM0 449 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 RBM48Q5RL73 367 aaKnown RBP11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 DNAJC14Q6Y2X3 702 aaPredicted RBP11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 TMEM143Q96AN5 459 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 SYT15Q9BQS2 421 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 C1QTNF1Q9BXJ1 281 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 RACGAP1Q9H0H5 632 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 UPP2O95045 317 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 EPHA3P29320 983 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 NPTX2P47972 431 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 E2F2Q14209 437 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 Q3C1V9 767 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 KLHL24Q6TFL4 600 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 ZNF621Q6ZSS3 439 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 VN1R5Q7Z5H4 357 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 LPGAT1Q92604 370 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 RFT1Q96AA3 541 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 CERS2Q96G23 380 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 SLITRK1Q96PX8 696 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 PURBQ96QR8 312 aaKnown RBP11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 APOL2Q9BQE5 337 aa11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 RGS17Q9UGC6 210 aaPredicted RBP11.86□□□□□ -0.51
CSPG4P12-201ENST00000558282 PPLO60437 1756 aa11.85□□□□□ -0.51
CSPG4P12-201ENST00000558282 RPTORQ8N122 1335 aa11.85□□□□□ -0.51
CSPG4P12-201ENST00000558282 PRAMEF33A0A0G2JMD5 474 aa11.85□□□□□ -0.51
CSPG4P12-201ENST00000558282 FBP2O00757 339 aa11.85□□□□□ -0.51
CSPG4P12-201ENST00000558282 MPZL2O60487 215 aa11.85□□□□□ -0.51
CSPG4P12-201ENST00000558282 PRAMEF10O60809 474 aa11.85□□□□□ -0.51
CSPG4P12-201ENST00000558282 LINGO3P0C6S8 592 aa11.85□□□□□ -0.51
CSPG4P12-201ENST00000558282 ETFBP38117 255 aa11.85□□□□□ -0.51
CSPG4P12-201ENST00000558282 SMCO1Q147U7 214 aa11.85□□□□□ -0.51
CSPG4P12-201ENST00000558282 KCNA10Q16322 511 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms