RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 MESP2Q0VG99 397 aa17.07■□□□□ 0.32
SNX1-203ENST00000558040 SPARCL1Q14515 664 aa17.07■□□□□ 0.32
SNX1-203ENST00000558040 GRM3Q14832 879 aa17.07■□□□□ 0.32
SNX1-203ENST00000558040 PCSK7Q16549 785 aa17.07■□□□□ 0.32
SNX1-203ENST00000558040 PTPRNQ16849 979 aa17.07■□□□□ 0.32
SNX1-203ENST00000558040 FAM153CQ494X1 144 aa17.07■□□□□ 0.32
SNX1-203ENST00000558040 FNDC3BQ53EP0 1204 aaKnown RBP17.07■□□□□ 0.32
SNX1-203ENST00000558040 DGKKQ5KSL6 1271 aa17.07■□□□□ 0.32
SNX1-203ENST00000558040 ATXN7L2Q5T6C5 722 aaPredicted RBP17.07■□□□□ 0.32
SNX1-203ENST00000558040 NAIF1Q69YI7 327 aaPredicted RBP17.07■□□□□ 0.32
SNX1-203ENST00000558040 LRRC8BQ6P9F7 803 aa17.07■□□□□ 0.32
SNX1-203ENST00000558040 KDELC1Q6UW63 502 aa17.07■□□□□ 0.32
SNX1-203ENST00000558040 RNF135Q8IUD6 432 aa17.07■□□□□ 0.32
SNX1-203ENST00000558040 RYBPQ8N488 228 aaPredicted RBP17.07■□□□□ 0.32
SNX1-203ENST00000558040 IFT43Q96FT9 208 aa17.07■□□□□ 0.32
SNX1-203ENST00000558040 FICDQ9BVA6 458 aa17.07■□□□□ 0.32
SNX1-203ENST00000558040 TNKS2Q9H2K2 1166 aa17.07■□□□□ 0.32
SNX1-203ENST00000558040 ARFGAP3Q9NP61 516 aa17.07■□□□□ 0.32
SNX1-203ENST00000558040 HEBP1Q9NRV9 189 aa17.07■□□□□ 0.32
SNX1-203ENST00000558040 SLCO3A1Q9UIG8 710 aa17.07■□□□□ 0.32
SNX1-203ENST00000558040 COL4A2P08572 1712 aa17.07■□□□□ 0.32
SNX1-203ENST00000558040 MIA3Q5JRA6 1907 aa17.06■□□□□ 0.32
SNX1-203ENST00000558040 SZT2Q5T011 3432 aa17.06■□□□□ 0.32
SNX1-203ENST00000558040 TTC24A2A3L6 582 aaPredicted RBP17.06■□□□□ 0.32
SNX1-203ENST00000558040 EPOP01588 193 aa17.06■□□□□ 0.32
SNX1-203ENST00000558040 ZP2Q05996 745 aa17.06■□□□□ 0.32
SNX1-203ENST00000558040 DHX9Q08211 1270 aaKnown RBP17.06■□□□□ 0.32
SNX1-203ENST00000558040 CDH17Q12864 832 aa17.06■□□□□ 0.32
SNX1-203ENST00000558040 CARD16Q5EG05 197 aa17.06■□□□□ 0.32
SNX1-203ENST00000558040 FBXO38Q6PIJ6 1188 aa17.06■□□□□ 0.32
SNX1-203ENST00000558040 NCEH1Q6PIU2 408 aa17.06■□□□□ 0.32
SNX1-203ENST00000558040 DNAAF3Q8N9W5 541 aa17.06■□□□□ 0.32
SNX1-203ENST00000558040 FEM1CQ96JP0 617 aa17.06■□□□□ 0.32
SNX1-203ENST00000558040 MRGPRX2Q96LB1 330 aa17.06■□□□□ 0.32
SNX1-203ENST00000558040 TUBGCP5Q96RT8 1024 aa17.06■□□□□ 0.32
SNX1-203ENST00000558040 CASS4Q9NQ75 786 aa17.06■□□□□ 0.32
SNX1-203ENST00000558040 DUSP12Q9UNI6 340 aa17.06■□□□□ 0.32
SNX1-203ENST00000558040 STARD13Q9Y3M8 1113 aa17.06■□□□□ 0.32
SNX1-203ENST00000558040 ARIH1Q9Y4X5 557 aaPredicted RBP17.06■□□□□ 0.32
SNX1-203ENST00000558040 TTC34A8MYJ7 566 aa17.05■□□□□ 0.32
SNX1-203ENST00000558040 NARSO43776 548 aaKnown RBP17.05■□□□□ 0.32
SNX1-203ENST00000558040 ZNF821O75541 412 aaPredicted RBP17.05■□□□□ 0.32
SNX1-203ENST00000558040 GJB3O75712 270 aa17.05■□□□□ 0.32
SNX1-203ENST00000558040 POP4O95707 220 aaKnown RBP17.05■□□□□ 0.32
SNX1-203ENST00000558040 HLA-DPA1P20036 260 aa17.05■□□□□ 0.32
SNX1-203ENST00000558040 DRD1P21728 446 aa17.05■□□□□ 0.32
SNX1-203ENST00000558040 ADRA1AP35348 466 aa17.05■□□□□ 0.32
SNX1-203ENST00000558040 CDK18Q07002 472 aa17.05■□□□□ 0.32
SNX1-203ENST00000558040 GRSF1Q12849 480 aaKnown RBP eCLIP17.05■□□□□ 0.32
SNX1-203ENST00000558040 PDIA2Q13087 525 aaKnown RBP17.05■□□□□ 0.32
SNX1-203ENST00000558040 CBLBQ13191 982 aa17.05■□□□□ 0.32
SNX1-203ENST00000558040 ZNF234Q14588 700 aa17.05■□□□□ 0.32
SNX1-203ENST00000558040 MYLK3Q32MK0 819 aa17.05■□□□□ 0.32
SNX1-203ENST00000558040 BBS9Q3SYG4 887 aa17.05■□□□□ 0.32
SNX1-203ENST00000558040 SERPINA13PQ6UXR4 307 aa17.05■□□□□ 0.32
SNX1-203ENST00000558040 Q6ZVU0 165 aa17.05■□□□□ 0.32
SNX1-203ENST00000558040 ZNF534Q76KX8 674 aa17.05■□□□□ 0.32
SNX1-203ENST00000558040 TMC3Q7Z5M5 1100 aa17.05■□□□□ 0.32
SNX1-203ENST00000558040 CAND1Q86VP6 1230 aaKnown RBP17.05■□□□□ 0.32
SNX1-203ENST00000558040 RELL1Q8IUW5 271 aa17.05■□□□□ 0.32
SNX1-203ENST00000558040 OR52K1Q8NGK4 314 aa17.05■□□□□ 0.32
SNX1-203ENST00000558040 FRS2Q8WU20 508 aa17.05■□□□□ 0.32
SNX1-203ENST00000558040 ANKRD7Q92527 254 aa17.05■□□□□ 0.32
SNX1-203ENST00000558040 LRRC39Q96DD0 335 aa17.05■□□□□ 0.32
SNX1-203ENST00000558040 MYO19Q96H55 970 aa17.05■□□□□ 0.32
SNX1-203ENST00000558040 ATP13A3Q9H7F0 1226 aa17.05■□□□□ 0.32
SNX1-203ENST00000558040 SAYSD1Q9NPB0 183 aa17.05■□□□□ 0.32
SNX1-203ENST00000558040 THAP10Q9P2Z0 257 aaPredicted RBP17.05■□□□□ 0.32
SNX1-203ENST00000558040 HECAQ9UBI9 543 aaPredicted RBP17.05■□□□□ 0.32
SNX1-203ENST00000558040 EVLQ9UI08 416 aaPredicted RBP17.05■□□□□ 0.32
SNX1-203ENST00000558040 EDDM13A0A1B0GTR0 161 aa17.04■□□□□ 0.32
SNX1-203ENST00000558040 E7ESA3 106 aa17.04■□□□□ 0.32
SNX1-203ENST00000558040 BNIP3LO60238 219 aa17.04■□□□□ 0.32
SNX1-203ENST00000558040 SOCS5O75159 536 aa17.04■□□□□ 0.32
SNX1-203ENST00000558040 USP12O75317 370 aa17.04■□□□□ 0.32
SNX1-203ENST00000558040 AGTP01019 485 aa17.04■□□□□ 0.32
SNX1-203ENST00000558040 SERPINA4P29622 427 aa17.04■□□□□ 0.32
SNX1-203ENST00000558040 MAGEA3P43357 314 aa17.04■□□□□ 0.32
SNX1-203ENST00000558040 CCNHP51946 323 aaPredicted RBP17.04■□□□□ 0.32
SNX1-203ENST00000558040 BCL2L1Q07817 233 aa17.04■□□□□ 0.32
SNX1-203ENST00000558040 TMEM196Q5HYL7 178 aa17.04■□□□□ 0.32
SNX1-203ENST00000558040 FNBP1LQ5T0N5 605 aa17.04■□□□□ 0.32
SNX1-203ENST00000558040 TXNDC11Q6PKC3 985 aa17.04■□□□□ 0.32
SNX1-203ENST00000558040 RANBP10Q6VN20 620 aa17.04■□□□□ 0.32
SNX1-203ENST00000558040 KCNV2Q8TDN2 545 aa17.04■□□□□ 0.32
SNX1-203ENST00000558040 PWWP2AQ96N64 755 aa17.04■□□□□ 0.32
SNX1-203ENST00000558040 APOL2Q9BQE5 337 aa17.04■□□□□ 0.32
SNX1-203ENST00000558040 TDRD1Q9BXT4 1180 aaKnown RBP17.04■□□□□ 0.32
SNX1-203ENST00000558040 ADGRE3Q9BY15 652 aa17.04■□□□□ 0.32
SNX1-203ENST00000558040 CPEB1Q9BZB8 566 aaKnown RBP17.04■□□□□ 0.32
SNX1-203ENST00000558040 BFARQ9NZS9 450 aa17.04■□□□□ 0.32
SNX1-203ENST00000558040 SORCS3Q9UPU3 1222 aa17.04■□□□□ 0.32
SNX1-203ENST00000558040 RAI2Q9Y5P3 530 aa17.04■□□□□ 0.32
SNX1-203ENST00000558040 LOC285095A0A1B0GVY8 99 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 SDR42E2A6NKP2 422 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 WASH3PC4AMC7 463 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 MAN2B1O00754 1011 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 NDST3O95803 873 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 CPP00450 1065 aa17.03■□□□□ 0.32
SNX1-203ENST00000558040 FGF1P05230 155 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms