RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 ZNF131P52739 623 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 SH3BGRP55822 239 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-247ENST00000557311 GFRA1P56159 465 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 CXADRP78310 365 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 TFAMQ00059 246 aaKnown RBP5.09□□□□□ -1.59
ATXN3-247ENST00000557311 IFRD2Q12894 506 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-247ENST00000557311 MYO1EQ12965 1108 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 TARDBPQ13148 414 aaKnown RBP eCLIP5.09□□□□□ -1.59
ATXN3-247ENST00000557311 SOWAHAQ2M3V2 549 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 INAVAQ3KP66 663 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 HECTD3Q5T447 861 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 SNX30Q5VWJ9 437 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 PCSK4Q6UW60 755 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 CRELD2Q6UXH1 353 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-247ENST00000557311 TTLL10Q6ZVT0 673 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 HTR3DQ70Z44 454 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 CENPQQ7L2Z9 268 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-247ENST00000557311 LIMS2Q7Z4I7 341 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 TMPRSS6Q8IU80 811 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 FAM114A1Q8IWE2 563 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 BBS7Q8IWZ6 715 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 ADGRF2Q8IZF7 708 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 NUP93Q8N1F7 819 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 MYO1HQ8N1T3 1032 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 FBXO18Q8NFZ0 1043 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 OVCA2Q8WZ82 227 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 PRCCQ92733 491 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-247ENST00000557311 TAF4BQ92750 862 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 IGSF8Q969P0 613 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 MYLPFQ96A32 169 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 ERLEC1Q96DZ1 483 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 SIPA1Q96FS4 1042 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 CDK5RAP3Q96JB5 506 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 C8orf76Q96K31 380 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 PLEKHG4BQ96PX9 1271 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 SLX1AQ9BQ83 275 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 SYT15Q9BQS2 421 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 CD93Q9NPY3 652 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 EXOC1Q9NV70 894 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 DNAJC17Q9NVM6 304 aaKnown RBP5.09□□□□□ -1.59
ATXN3-247ENST00000557311 USP36Q9P275 1121 aaKnown RBP5.09□□□□□ -1.59
ATXN3-247ENST00000557311 FBLN5Q9UBX5 448 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 FTSJ1Q9UET6 329 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 CHORDC1Q9UHD1 332 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-247ENST00000557311 EIF2B4Q9UI10 523 aaKnown RBP5.09□□□□□ -1.59
ATXN3-247ENST00000557311 ITGA11Q9UKX5 1188 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 ANKRD6Q9Y2G4 727 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 IKBKGQ9Y6K9 419 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 STON1Q9Y6Q2 735 aa5.09□□□□□ -1.59
ATXN3-247ENST00000557311 LOC400499M0QZD8 3231 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 LAMA1P25391 3075 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 THADAQ6YHU6 1953 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 TRAV20A0A0B4J274 112 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 KCNJ18B7U540 433 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 F8VP50 259 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 GOLGA6L19H0YKK7 550 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 KCNK3O14649 394 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 PRRG2O14669 202 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 PDPK1O15530 556 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 PAPSS1O43252 624 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-247ENST00000557311 COCHO43405 550 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 SLC26A4O43511 780 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 HCRTO43612 131 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 CACNG3O60359 315 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 SYNCRIPO60506 623 aaKnown RBP5.08□□□□□ -1.6
ATXN3-247ENST00000557311 RTN3O95197 1032 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-247ENST00000557311 LDHAP00338 332 aaKnown RBP5.08□□□□□ -1.6
ATXN3-247ENST00000557311 IGLV3-19P01714 112 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 KRT18P05783 430 aaKnown RBP5.08□□□□□ -1.6
ATXN3-247ENST00000557311 KRT19P08727 400 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 PDGFRBP09619 1106 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 CCDC159P0C7I6 412 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 CISD3P0C7P0 127 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 ACADMP11310 421 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 C6P13671 934 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 LCP1P13796 627 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 TYRP14679 529 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 WARSP23381 471 aaKnown RBP5.08□□□□□ -1.6
ATXN3-247ENST00000557311 ADSSP30520 456 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 GNL1P36915 607 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-247ENST00000557311 MC3RP41968 323 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 IL12RB1P42701 662 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 TUBP50607 506 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 TOB1P50616 345 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-247ENST00000557311 CCT8P50990 548 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 UCNP55089 124 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 TLE3Q04726 772 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 SRSF1Q07955 248 aaKnown RBP eCLIP5.08□□□□□ -1.6
ATXN3-247ENST00000557311 LSAMPQ13449 338 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 SLC9A5Q14940 896 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 KRT72Q14CN4 511 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 CCDC142Q17RM4 750 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 FUT11Q495W5 492 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 C4orf46Q504U0 113 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 SYT10Q6XYQ8 523 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 GBP6Q6ZN66 633 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 MILR1Q7Z6M3 343 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 SRLQ86TD4 932 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 IGDCC3Q8IVU1 814 aa5.08□□□□□ -1.6
ATXN3-247ENST00000557311 LMNTD2Q8IXW0 634 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms