RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 SERPINB6P35237 376 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 RECQLP46063 649 aaPredicted RBP9.79□□□□□ -0.84
SRP54-210ENST00000556380 RGRP47804 291 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 CSNK1DP48730 415 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 DHPSP49366 369 aaPredicted RBP9.79□□□□□ -0.84
SRP54-210ENST00000556380 DNA2P51530 1060 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 TAS2R38P59533 333 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 NSUN2Q08J23 767 aaKnown RBP eCLIP9.79□□□□□ -0.84
SRP54-210ENST00000556380 SLC10A7Q0GE19 358 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 SPEM2Q0P670 501 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 KIF5AQ12840 1032 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 RFTN1Q14699 578 aaPredicted RBP9.79□□□□□ -0.84
SRP54-210ENST00000556380 ATXN7L2Q5T6C5 722 aaPredicted RBP9.79□□□□□ -0.84
SRP54-210ENST00000556380 PIP5KL1Q5T9C9 394 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 AGBL4Q5VU57 503 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 LYSMD4Q5XG99 296 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.79□□□□□ -0.84
SRP54-210ENST00000556380 ZNF662Q6ZS27 426 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 DAAM2Q86T65 1068 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 NT5DC3Q86UY8 548 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 ZNF354CQ86Y25 554 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 SYT12Q8IV01 421 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 RNF10Q8N5U6 811 aaKnown RBP9.79□□□□□ -0.84
SRP54-210ENST00000556380 TEX26Q8N6G2 289 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 PLD5Q8N7P1 536 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 TSEN2Q8NCE0 465 aaKnown RBP9.79□□□□□ -0.84
SRP54-210ENST00000556380 OR6K2Q8NGY2 324 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 KIAA1524Q8TCG1 905 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 MAML1Q92585 1016 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 FOXJ1Q92949 421 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 FATE1Q969F0 183 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 LRIG1Q96JA1 1093 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 PDLIM2Q96JY6 352 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 CCDC114Q96M63 670 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 PSKH2Q96QS6 385 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 CPEB1Q9BZB8 566 aaKnown RBP9.79□□□□□ -0.84
SRP54-210ENST00000556380 DTLQ9NZJ0 730 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 NCDNQ9UBB6 729 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 GMEB2Q9UKD1 530 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 THADAQ6YHU6 1953 aa9.79□□□□□ -0.84
SRP54-210ENST00000556380 CNOT1A5YKK6 2376 aaKnown RBP9.78□□□□□ -0.84
SRP54-210ENST00000556380 PLRG1O43660 514 aaKnown RBP9.78□□□□□ -0.84
SRP54-210ENST00000556380 NDUFS2O75306 463 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 PALMO75781 387 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 TNNT1P13805 278 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 CR2P20023 1033 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 ITGB7P26010 798 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 CTNNA2P26232 953 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 CTNNA1P35221 906 aaKnown RBP9.78□□□□□ -0.84
SRP54-210ENST00000556380 HOXD12P35452 270 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 MPLP40238 635 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 GARSP41250 739 aaKnown RBP9.78□□□□□ -0.84
SRP54-210ENST00000556380 CCR5P51681 352 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 ADPRHP54922 357 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 RHOAP61586 193 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 CREB5Q02930 508 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 ADCY2Q08462 1091 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 CCDC6Q16204 474 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 CSRP2Q16527 193 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 POM121L1PQ3SYA9 428 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 TMCO4Q5TGY1 634 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 DCAF12L1Q5VU92 463 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 NCEH1Q6PIU2 408 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 SPOCD1Q6ZMY3 1216 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 ERN2Q76MJ5 926 aaKnown RBP9.78□□□□□ -0.84
SRP54-210ENST00000556380 ARMCX6Q7L4S7 300 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 RCOR2Q8IZ40 523 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 PGBD5Q8N414 524 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 OR2T34Q8NGX1 318 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 EXD1Q8NHP7 514 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 GRIN3AQ8TCU5 1115 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 GANCQ8TET4 914 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 PIGKQ92643 395 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 HPS1Q92902 700 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 BIRC7Q96CA5 298 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 HSPA12BQ96MM6 686 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 GDAP1L1Q96MZ0 367 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 OLFM3Q96PB7 478 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 OMDQ99983 421 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 KDM4CQ9H3R0 1056 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 EBF2Q9HAK2 575 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 SP110Q9HB58 689 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 VPS45Q9NRW7 570 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 SEMA4GQ9NTN9 838 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 SEPT3Q9UH03 358 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 EVLQ9UI08 416 aaPredicted RBP9.78□□□□□ -0.84
SRP54-210ENST00000556380 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.78□□□□□ -0.84
SRP54-210ENST00000556380 SLCO1B1Q9Y6L6 691 aa9.78□□□□□ -0.84
SRP54-210ENST00000556380 NYNRINQ9P2P1 1898 aaKnown RBP9.77□□□□□ -0.85
SRP54-210ENST00000556380 CACNA1AO00555 2505 aa9.77□□□□□ -0.85
SRP54-210ENST00000556380 hCG_1818297A0A087WSY0 165 aa9.77□□□□□ -0.85
SRP54-210ENST00000556380 MACROD2A1Z1Q3 448 aa9.77□□□□□ -0.85
SRP54-210ENST00000556380 LRRC72A6NJI9 287 aa9.77□□□□□ -0.85
SRP54-210ENST00000556380 C16orf96A6NNT2 1141 aa9.77□□□□□ -0.85
SRP54-210ENST00000556380 KPNA3O00505 521 aaPredicted RBP9.77□□□□□ -0.85
SRP54-210ENST00000556380 KRIT1O00522 736 aa9.77□□□□□ -0.85
SRP54-210ENST00000556380 MATN3O15232 486 aa9.77□□□□□ -0.85
SRP54-210ENST00000556380 SPINT1O43278 529 aa9.77□□□□□ -0.85
SRP54-210ENST00000556380 LATO43561 262 aa9.77□□□□□ -0.85
SRP54-210ENST00000556380 GJB3O75712 270 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms