RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 YTHDF3Q7Z739 585 aaKnown RBP3.63□□□□□ -1.83
SRP54-209ENST00000555746 HEATR4Q86WZ0 1026 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 ADGRF4Q8IZF3 695 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 TMTC2Q8N394 836 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 TCP11L2Q8N4U5 519 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 TMEM217Q8N7C4 229 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 ZNF366Q8N895 744 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 SCAIQ8N9R8 606 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 RFWD2Q8NHY2 731 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 ZCCHC10Q8TBK6 192 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 HDAC7Q8WUI4 952 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 DDB2Q92466 427 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 MPP4Q96JB8 637 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 TEFMQ96QE5 360 aaKnown RBP3.63□□□□□ -1.83
SRP54-209ENST00000555746 UBA5Q9GZZ9 404 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.63□□□□□ -1.83
SRP54-209ENST00000555746 ACAD9Q9H845 621 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 TTC12Q9H892 705 aaPredicted RBP3.63□□□□□ -1.83
SRP54-209ENST00000555746 CFDP1Q9UEE9 299 aaPredicted RBP3.63□□□□□ -1.83
SRP54-209ENST00000555746 FBXO40Q9UH90 709 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 CNOT7Q9UIV1 285 aaKnown RBP3.63□□□□□ -1.83
SRP54-209ENST00000555746 SLC8A2Q9UPR5 921 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 OSGIN2Q9Y236 505 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 CLDN16Q9Y5I7 305 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 PASKQ96RG2 1323 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 ARFGEF1Q9Y6D6 1849 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 ARHGEF10O15013 1369 aa3.63□□□□□ -1.83
SRP54-209ENST00000555746 MUC6Q6W4X9 2439 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 SPTBN5Q9NRC6 3674 aaKnown RBP3.62□□□□□ -1.83
SRP54-209ENST00000555746 LTBP1Q14766 1721 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 DPPA5A6NC42 116 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 OR6C68A6NDL8 312 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 FOXO6A8MYZ6 492 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 TLX3O43711 291 aaPredicted RBP3.62□□□□□ -1.83
SRP54-209ENST00000555746 HBP1O60381 514 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 PPFIA2O75334 1257 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 DDAH2O95865 285 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 PRR35P0CG20 571 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 FCGR2AP12318 317 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 KELP23276 732 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 PRKCHP24723 683 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 ARHGAP25P42331 645 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 CPA2P48052 419 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 C21orf58P58505 322 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 MPP1Q00013 466 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 SRSF1Q07955 248 aaKnown RBP eCLIP3.62□□□□□ -1.83
SRP54-209ENST00000555746 SRSF4Q08170 494 aaKnown RBP3.62□□□□□ -1.83
SRP54-209ENST00000555746 G3BP1Q13283 466 aaKnown RBP eCLIP3.62□□□□□ -1.83
SRP54-209ENST00000555746 CAMK1Q14012 370 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 IL13RA2Q14627 380 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 TRIP6Q15654 476 aaKnown RBP3.62□□□□□ -1.83
SRP54-209ENST00000555746 RPE65Q16518 533 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 PRICKLE4Q2TBC4 344 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 AP5B1Q2VPB7 878 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 COLEC12Q5KU26 742 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 TTC39AQ5SRH9 613 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 SLC9C2Q5TAH2 1124 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 NAPEPLDQ6IQ20 393 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 DDIASQ8IXT1 998 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 PCYOX1LQ8NBM8 494 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 PIGOQ8TEQ8 1089 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 RAB40AQ8WXH6 277 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 CUL5Q93034 780 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 COQ8BQ96D53 544 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 ZBTB10Q96DT7 871 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 ELP4Q96EB1 424 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 WDR83Q9BRX9 315 aaKnown RBP3.62□□□□□ -1.83
SRP54-209ENST00000555746 TUBB6Q9BUF5 446 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.62□□□□□ -1.83
SRP54-209ENST00000555746 SCNM1Q9BWG6 230 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 PAIP1Q9H074 479 aaKnown RBP3.62□□□□□ -1.83
SRP54-209ENST00000555746 LMAN2LQ9H0V9 348 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 MROH8Q9H579 483 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 SPAG4Q9NPE6 437 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 TMEM45AQ9NWC5 275 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 BEX4Q9NWD9 120 aaPredicted RBP3.62□□□□□ -1.83
SRP54-209ENST00000555746 PPP1R14DQ9NXH3 145 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 ALKBH4Q9NXW9 302 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 SLC25A10Q9UBX3 287 aaPredicted RBP3.62□□□□□ -1.83
SRP54-209ENST00000555746 ICKQ9UPZ9 632 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 LAMP3Q9UQV4 416 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 CYP46A1Q9Y6A2 500 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 ARHGEF5Q12774 1597 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 SBNO1A3KN83 1393 aa3.62□□□□□ -1.83
SRP54-209ENST00000555746 SPATA31E1Q6ZUB1 1445 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 KNDC1Q76NI1 1749 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 RANBP2P49792 3224 aaKnown RBP3.61□□□□□ -1.83
SRP54-209ENST00000555746 BRCA1P38398 1863 aaKnown RBP3.61□□□□□ -1.83
SRP54-209ENST00000555746 CCDC88AQ3V6T2 1871 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 TRBV5-7A0A0A0MS05 114 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 A0A0G2JK05 382 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 GLTPD2A6NH11 291 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 TEX22C9J3V5 150 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 RHODO00212 210 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 PER2O15055 1255 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 EPB41L2O43491 1005 aaKnown RBP3.61□□□□□ -1.83
SRP54-209ENST00000555746 STRNO43815 780 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 SH3BP5O60239 455 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 UGDHO60701 494 aa3.61□□□□□ -1.83
SRP54-209ENST00000555746 WDHD1O75717 1129 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms