RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 ECT2LQ008S8 904 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 KDSRQ06136 332 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 SULT2A1Q06520 285 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 CDH17Q12864 832 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 GPS2Q13227 327 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 GEN1Q17RS7 908 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 ACCSLQ4AC99 568 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 UBAP2Q5T6F2 1119 aaKnown RBP9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 GRAMD4Q6IC98 578 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 LRIG3Q6UXM1 1119 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 SRLQ86TD4 932 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 METTL3Q86U44 580 aaKnown RBP9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 C12orf40Q86WS4 652 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 IGDCC3Q8IVU1 814 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 IQCKQ8N0W5 287 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 MPP5Q8N3R9 675 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 RYBPQ8N488 228 aaPredicted RBP9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 SLC25A41Q8N5S1 370 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 OR2W6PQ8NHA6 318 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 SUSD6Q92537 303 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 LRRC39Q96DD0 335 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 STAMBPL1Q96FJ0 436 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 SIGLEC10Q96LC7 697 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 NUDCD1Q96RS6 583 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 CDX2Q99626 313 aaPredicted RBP9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 MGME1Q9BQP7 344 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 TRMT61BQ9BVS5 477 aaKnown RBP9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 EPB41L4BQ9H329 900 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 UBE2ZQ9H832 354 aaPredicted RBP9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 VPS45Q9NRW7 570 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 SYBUQ9NX95 663 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 BFARQ9NZS9 450 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 SAMD15Q9P1V8 674 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 DEC1Q9P2X7 70 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 EPS15L1Q9UBC2 864 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 LHX3Q9UBR4 397 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 ZC3H7BQ9UGR2 993 aaKnown RBP9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 FBXO10Q9UK96 956 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 TEX264Q9Y6I9 313 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 NUMBLQ9Y6R0 609 aa9.78□□□□□ -0.84
HNRNPC-220ENST00000555585 RANBP2P49792 3224 aaKnown RBP9.77□□□□□ -0.84
HNRNPC-220ENST00000555585 A0A087WUV0 522 aaPredicted RBP9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 MBTPS2O43462 519 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 SMAD6O43541 496 aaKnown RBP9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 ATP9BO43861 1147 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 BNIP3LO60238 219 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 OPA1O60313 960 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 TULP3O75386 442 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 IGSF6O95976 241 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 SHBGP04278 402 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 TSHRP16473 764 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 SSTR1P30872 391 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 NNMTP40261 264 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 MAGEA3P43357 314 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 EIF3BP55884 814 aaKnown RBP9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 CRADDP78560 199 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 CDK18Q07002 472 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 NSUN2Q08J23 767 aaKnown RBP eCLIP9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 CBLBQ13191 982 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 SMAD4Q13485 552 aaKnown RBP9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 CEP85LQ5SZL2 805 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 CERCAMQ5T4B2 595 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 ATXN7L2Q5T6C5 722 aaPredicted RBP9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 ALG1LQ6GMV1 187 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 KIAA0907Q7Z7F0 614 aaPredicted RBP9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 ADIPOR2Q86V24 386 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 AGGF1Q8N302 714 aaeCLIP9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 SH2D3CQ8N5H7 860 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 PAF1Q8N7H5 531 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 GOLGA6L1Q8N7Z2 621 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 CSGALNACT1Q8TDX6 532 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 TTC17Q96AE7 1141 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 EBNA1BP2Q99848 306 aaKnown RBP9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 CCDC77Q9BR77 488 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 RPP25Q9BUL9 199 aaKnown RBP9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 TM6SF2Q9BZW4 377 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 CIPCQ9C0C6 399 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 TNKS2Q9H2K2 1166 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 BRD9Q9H8M2 597 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 NOD2Q9HC29 1040 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 LRRC4CQ9HCJ2 640 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 GTSE1Q9NYZ3 720 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 ERVW-1Q9UQF0 538 aa9.77□□□□□ -0.85
HNRNPC-220ENST00000555585 ANKRD36A6QL64 1941 aa9.76□□□□□ -0.85
HNRNPC-220ENST00000555585 CXorf51AA0A1B0GTR3 108 aa9.76□□□□□ -0.85
HNRNPC-220ENST00000555585 TLDC2A0PJX2 215 aa9.76□□□□□ -0.85
HNRNPC-220ENST00000555585 OTOL1A6NHN0 477 aaPredicted RBP9.76□□□□□ -0.85
HNRNPC-220ENST00000555585 GOLGA6L10A6NI86 522 aa9.76□□□□□ -0.85
HNRNPC-220ENST00000555585 SMIM23A6NLE4 172 aa9.76□□□□□ -0.85
HNRNPC-220ENST00000555585 C2CD4DB7Z1M9 353 aa9.76□□□□□ -0.85
HNRNPC-220ENST00000555585 SPAG6O75602 509 aa9.76□□□□□ -0.85
HNRNPC-220ENST00000555585 ASLP04424 464 aa9.76□□□□□ -0.85
HNRNPC-220ENST00000555585 ATP5BP06576 529 aaKnown RBP9.76□□□□□ -0.85
HNRNPC-220ENST00000555585 ABHD2P08910 425 aa9.76□□□□□ -0.85
HNRNPC-220ENST00000555585 GSTA2P09210 222 aa9.76□□□□□ -0.85
HNRNPC-220ENST00000555585 NUDT17P0C025 328 aa9.76□□□□□ -0.85
HNRNPC-220ENST00000555585 CR2P20023 1033 aa9.76□□□□□ -0.85
HNRNPC-220ENST00000555585 CA4P22748 312 aa9.76□□□□□ -0.85
HNRNPC-220ENST00000555585 GJA4P35212 333 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms