RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 GOLGA6L9A6NEM1 432 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 KPNA3O00505 521 aaPredicted RBP10.75□□□□□ -0.69
TMEM260-206ENST00000555046 KRIT1O00522 736 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 MID1O15344 667 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 MAFKO60675 156 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 LRP3O75074 770 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 GNSP15586 552 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 TGM2P21980 687 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 HOXD12P35452 270 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 NUDT1P36639 197 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 CDKN2BP42772 138 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 PSMD8P48556 350 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 NUMBP49757 651 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 SUOXP51687 545 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 CCNHP51946 323 aaPredicted RBP10.75□□□□□ -0.69
TMEM260-206ENST00000555046 POLR2LP62875 67 aaKnown RBP10.75□□□□□ -0.69
TMEM260-206ENST00000555046 CCZ1BP86790 482 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 CCZ1P86791 482 aaPredicted RBP10.75□□□□□ -0.69
TMEM260-206ENST00000555046 CCDC173Q0VFZ6 552 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 GALNT2Q10471 571 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 ZNF235Q14590 738 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 CYTH1Q15438 398 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 TAZQ16635 292 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 CFAP58Q5T655 872 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 NEK5Q6P3R8 708 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 FBXL19Q6PCT2 694 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 MFSD7Q6UXD7 560 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.75□□□□□ -0.69
TMEM260-206ENST00000555046 SPOCD1Q6ZMY3 1216 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 NT5DC3Q86UY8 548 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 ZSCAN30Q86W11 494 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 NPWQ8N729 165 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 PQLC3Q8N755 202 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 PLD5Q8N7P1 536 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 CEP76Q8TAP6 659 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 RAB7BQ96AH8 199 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 ERLEC1Q96DZ1 483 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 ZNF419Q96HQ0 510 aaPredicted RBP10.75□□□□□ -0.69
TMEM260-206ENST00000555046 PDLIM2Q96JY6 352 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 ZNF641Q96N77 438 aaPredicted RBP10.75□□□□□ -0.69
TMEM260-206ENST00000555046 PSKH2Q96QS6 385 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 HDAC8Q9BY41 377 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 TM6SF2Q9BZW4 377 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 NEUROG2Q9H2A3 272 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 MTG2Q9H4K7 406 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 PDFQ9HBH1 243 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 LZTFL1Q9NQ48 299 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 ETNK2Q9NVF9 386 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 KLHL11Q9NVR0 708 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 SMG5Q9UPR3 1016 aaKnown RBP10.75□□□□□ -0.69
TMEM260-206ENST00000555046 INVSQ9Y283 1065 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 HEY1Q9Y5J3 304 aa10.75□□□□□ -0.69
TMEM260-206ENST00000555046 MYO18AQ92614 2054 aaKnown RBP10.74□□□□□ -0.69
TMEM260-206ENST00000555046 TBC1D3DA0A087WVF3 549 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 TBC1D3IA0A087WXS9 549 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 TBC1D3EA0A087X179 549 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 TBC1D3KA0A087X1G2 549 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.74□□□□□ -0.69
TMEM260-206ENST00000555046 A0A1W2PP55 124 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 TBC1D3FA6NER0 549 aaPredicted RBP10.74□□□□□ -0.69
TMEM260-206ENST00000555046 METTL12A8MUP2 240 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 TBC1D3LB9A6J9 549 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 CST8O60676 142 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 ZNF821O75541 412 aaPredicted RBP10.74□□□□□ -0.69
TMEM260-206ENST00000555046 LEFTY1O75610 366 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 TBC1D3HP0C7X1 549 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 KRT10P13645 584 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 VAV1P15498 845 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 XPAP23025 273 aaPredicted RBP10.74□□□□□ -0.69
TMEM260-206ENST00000555046 ITGB7P26010 798 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 PTPN7P35236 360 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 MMP13P45452 471 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 DHPSP49366 369 aaPredicted RBP10.74□□□□□ -0.69
TMEM260-206ENST00000555046 PEX5P50542 639 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 AP1S1P61966 158 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 SRSF5Q13243 272 aaKnown RBP10.74□□□□□ -0.69
TMEM260-206ENST00000555046 RPS6KA1Q15418 735 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 ZNF805Q5CZA5 627 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 LYSMD4Q5XG99 296 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 KAZNQ674X7 775 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 PMS2CLQ68D20 193 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 TBC1D3GQ6DHY5 549 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 TBC1D3CQ6IPX1 549 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 GDPD4Q6W3E5 623 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 LEKR1Q6ZMV7 388 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 ERN2Q76MJ5 926 aaKnown RBP10.74□□□□□ -0.69
TMEM260-206ENST00000555046 CPNE8Q86YQ8 564 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 CCDC13Q8IYE1 715 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 TBC1D3Q8IZP1 549 aaPredicted RBP10.74□□□□□ -0.69
TMEM260-206ENST00000555046 NDUFAF2Q8N183 169 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 FAM160A2Q8N612 972 aaPredicted RBP10.74□□□□□ -0.69
TMEM260-206ENST00000555046 PAF1Q8N7H5 531 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 TTC13Q8NBP0 860 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 OR2T34Q8NGX1 318 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 OR14C36Q8NHC7 312 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 SKA1Q96BD8 255 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 HAUS1Q96CS2 278 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 HDAC11Q96DB2 347 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 FEM1CQ96JP0 617 aa10.74□□□□□ -0.69
TMEM260-206ENST00000555046 GPR174Q9BXC1 333 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms