RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 FAM84BQ96KN1 310 aaPredicted RBP6.94□□□□□ -1.3
SYNE2-216ENST00000555002 LMLNQ96KR4 655 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 HIST1H2AAQ96QV6 131 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 CPNE1Q99829 537 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 ACE2Q9BYF1 805 aaPredicted RBP6.94□□□□□ -1.3
SYNE2-216ENST00000555002 CISHQ9NSE2 258 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 IKZF2Q9UKS7 526 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 NUP153P49790 1475 aaKnown RBP6.94□□□□□ -1.3
SYNE2-216ENST00000555002 PDHXO00330 501 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 SEMA3DO95025 777 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 YBX3P16989 372 aaKnown RBP eCLIP6.94□□□□□ -1.3
SYNE2-216ENST00000555002 CCNG2Q16589 344 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 ALG1LQ6GMV1 187 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 WDR93Q6P2C0 686 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 COL23A1Q86Y22 540 aaPredicted RBP6.94□□□□□ -1.3
SYNE2-216ENST00000555002 CD302Q8IX05 232 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 RP9Q8TA86 221 aaKnown RBP6.94□□□□□ -1.3
SYNE2-216ENST00000555002 STARD8Q92502 1023 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 IRX2Q9BZI1 471 aaPredicted RBP6.94□□□□□ -1.3
SYNE2-216ENST00000555002 PARPBPQ9NWS1 579 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 GMPPBQ9Y5P6 360 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 C9P02748 559 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 KCNJ5P48544 419 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 C5orf22Q49AR2 442 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 PLPP4Q5VZY2 271 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 SLC30A6Q6NXT4 461 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 GET4Q7L5D6 327 aaPredicted RBP6.94□□□□□ -1.3
SYNE2-216ENST00000555002 USP38Q8NB14 1042 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 Q96MT0 163 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 PLGRKTQ9HBL7 147 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 MYRFQ9Y2G1 1151 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 NOX1Q9Y5S8 564 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 BHMG1C9JSJ3 638 aaPredicted RBP6.94□□□□□ -1.3
SYNE2-216ENST00000555002 SCAMP1O15126 338 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 SCNN1AP37088 669 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 NT5C2P49902 561 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 PCDH1Q08174 1060 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 CBX2Q14781 532 aaPredicted RBP6.94□□□□□ -1.3
SYNE2-216ENST00000555002 SPERTQ8NA61 448 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 TMEM176AQ96HP8 235 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 COPS4Q9BT78 406 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 MTA3Q9BTC8 594 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 C1orf50Q9BV19 199 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 CHID1Q9BWS9 393 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 RNF121Q9H920 327 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 CYP3A43Q9HB55 503 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 MRTO4Q9UKD2 239 aaKnown RBP6.94□□□□□ -1.3
SYNE2-216ENST00000555002 ERGIC3Q9Y282 383 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 SLC27A6Q9Y2P4 619 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 IRAK3Q9Y616 596 aa6.94□□□□□ -1.3
SYNE2-216ENST00000555002 ITSN1Q15811 1721 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 HYKKA2RU49 373 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 CACNB4O00305 520 aaPredicted RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 SEC24AO95486 1093 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 TMEM253P0C7T8 217 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 GRK5P34947 590 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 C1orf189Q5VU69 101 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 C16orf46Q6P387 395 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 ZNF227Q86WZ6 799 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 MPP5Q8N3R9 675 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 OR2L8Q8NGY9 312 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 VANGL1Q8TAA9 524 aaPredicted RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 TBATAQ96M53 351 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 MRPL9Q9BYD2 267 aaKnown RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 TM6SF2Q9BZW4 377 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 TMEM216Q9P0N5 145 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 A0A087X1B8 175 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 SLC33A1O00400 549 aaPredicted RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 CATP04040 527 aaKnown RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 SLC35G4P0C7Q5 338 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 MNDAP41218 407 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 LY6KQ17RY6 165 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 FBXO47Q5MNV8 452 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 GRTP1Q5TC63 336 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 P4HA3Q7Z4N8 544 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 CNPY4Q8N129 248 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 METTL21AQ8WXB1 218 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 S100ZQ8WXG8 99 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 AIF1LQ9BQI0 150 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 IMP3Q9NV31 184 aaKnown RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 MORF4L1Q9UBU8 362 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 SLCO1B7G3V0H7 640 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 FFAR2O15552 330 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 PEX14O75381 377 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 IL12BP29460 328 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 ARHGAP36Q6ZRI8 547 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 SLC2A14Q8TDB8 520 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 BRSK1Q8TDC3 778 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 DNASE1L2Q92874 299 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 COQ8BQ96D53 544 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 FDXACB1Q9BRP7 624 aaPredicted RBP6.93□□□□□ -1.3
SYNE2-216ENST00000555002 BRD9Q9H8M2 597 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 VAPBO95292 243 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 SERPINA1P01009 418 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 APOC1P02654 83 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 IRF8Q02556 426 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 NR1D2Q14995 579 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 ABCA11PQ4W5N1 156 aa6.93□□□□□ -1.3
SYNE2-216ENST00000555002 INO80DQ53TQ3 878 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms