RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 CDY1Q9Y6F8 540 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 A3GALT2U3KPV4 340 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 ANKRD61A6NGH8 418 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 I3L4J1 428 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 TPP1O14773 563 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 VPS4BO75351 444 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 KRT36O76013 467 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 OR4F21O95013 312 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 RASAL1O95294 804 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 CBX6O95503 412 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 ITGB3P05106 788 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 MYL2P10916 166 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 UMPSP11172 480 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 ITGAMP11215 1152 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 INSRRP14616 1297 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 FGFR3P22607 806 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 HLA-FP30511 346 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 CETN2P41208 172 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 MAPKAPK2P49137 400 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 CDK9P50750 372 aaKnown RBP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 ARFIP1P53367 373 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 HMGCS2P54868 508 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 DSG1Q02413 1049 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 GSTM4Q03013 218 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 MTAPQ13126 283 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 TUBA3CQ13748 450 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 CEACAM7Q14002 265 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 TTLL12Q14166 644 aaPredicted RBP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 FASTKD1Q53R41 847 aaKnown RBP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 ZNF678Q5SXM1 525 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 CYP4A22Q5TCH4 519 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 OR4F3Q6IEY1 312 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 RWDD4Q6NW29 188 aaKnown RBP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 PRMT9Q6P2P2 845 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 NOTUMQ6P988 496 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 NEK10Q6ZWH5 1172 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 TRIM46Q7Z4K8 759 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 TTC7BQ86TV6 843 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 FAM71DQ8N9W8 422 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 TRPV1Q8NER1 839 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 TANKQ92844 425 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 CCDC126Q96EE4 140 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 VMP1Q96GC9 406 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 MMP19Q99542 508 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 MRPL57Q9BQC6 102 aaKnown RBP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 FEM1AQ9BSK4 669 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 JAM3Q9BX67 310 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 DERL2Q9GZP9 239 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 ABHD16BQ9H3Z7 469 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 DPEP3Q9H4B8 488 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 FZD3Q9NPG1 666 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 NLE1Q9NVX2 485 aaPredicted RBP3.49□□□□□ -1.85
SEC23A-207ENST00000554615 TUBGCP4Q9UGJ1 667 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 DSEQ9UL01 958 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 ZNF711Q9Y462 761 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 L3MBTL1Q9Y468 752 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 HSPE1-MOB4S4R3N1 261 aa3.49□□□□□ -1.85
SEC23A-207ENST00000554615 CCDC162PA2VCL2 907 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 TRIM49D1C9J1S8 452 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 E9PBE3 544 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 FAM72CH0Y354 149 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 RNF8O76064 485 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 BEST1O76090 585 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 S1PR4O95977 384 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 ZBED1O96006 694 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 ASLP04424 464 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 GUSBP08236 651 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 SMIM10L2AP0DMW4 78 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 SMIM10L2BP0DMW5 78 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 CTSAP10619 480 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 BMP1P13497 986 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 CD1DP15813 335 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 ENDOUP21128 410 aaKnown RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 MZF1P28698 734 aaPredicted RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 CLCN5P51795 746 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 CACNA2D1P54289 1103 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 ATP11AP98196 1134 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 KLC1Q07866 573 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 MYBPC3Q14896 1274 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 FAM72AQ5TYM5 149 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 FYB2Q5VWT5 728 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 FAM72DQ6L9T8 149 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 LRRC8EQ6NSJ5 796 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 ZNF549Q6P9A3 640 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 KCNT2Q6UVM3 1135 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 CCDC80Q76M96 950 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 RTL10Q7L3V2 364 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 EEPD1Q7L9B9 569 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 KDELC2Q7Z4H8 507 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 TFAP2DQ7Z6R9 452 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 LRRTM3Q86VH5 581 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 FAM72BQ86X60 149 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 BBS5Q8N3I7 341 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 RTL3Q8N8U3 475 aaKnown RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 FBXO15Q8NCQ5 510 aaPredicted RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 GOT1L1Q8NHS2 421 aaPredicted RBP3.48□□□□□ -1.85
SEC23A-207ENST00000554615 NPLOC4Q8TAT6 608 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 NAT14Q8WUY8 206 aa3.48□□□□□ -1.85
SEC23A-207ENST00000554615 APOBEC4Q8WW27 367 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms