RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 KAT8Q9H7Z6 458 aaKnown RBP3.34□□□□□ -1.88
SYNE2-212ENST00000554584 RYDENQ9NUL5 291 aaKnown RBP3.34□□□□□ -1.88
SYNE2-212ENST00000554584 KLQ9UEF7 1012 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF221Q9UK13 617 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 ANKDD1BA6NHY2 528 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF879B4DU55 563 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 LDB2O43679 373 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 EEF1A2Q05639 463 aaKnown RBP3.34□□□□□ -1.88
SYNE2-212ENST00000554584 SLC10A7Q0GE19 358 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 LRRC38Q5VT99 294 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 GPR139Q6DWJ6 353 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 NMD3Q96D46 503 aaKnown RBP3.34□□□□□ -1.88
SYNE2-212ENST00000554584 MFSD3Q96ES6 412 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF560Q96MR9 790 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 DPEP2Q9H4A9 486 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 GPAMQ9HCL2 828 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 KLHL28Q9NXS3 571 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 PCNX1Q96RV3 2341 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 IGF2BP3O00425 579 aaKnown RBP eCLIP3.34□□□□□ -1.88
SYNE2-212ENST00000554584 NR2C1P13056 603 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 TGM2P21980 687 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 PPP2R1BP30154 601 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 ZC3H12AQ5D1E8 599 aaKnown RBP3.34□□□□□ -1.88
SYNE2-212ENST00000554584 MAP4K3Q8IVH8 894 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 ARMC10Q8N2F6 343 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 OR8K3Q8NH51 312 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 PXYLP1Q8TE99 480 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 CLPBQ9H078 707 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 FAM86C1Q9NVL1 165 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 HSFX1Q9UBD0 423 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 PI4KBQ9UBF8 816 aa3.34□□□□□ -1.88
SYNE2-212ENST00000554584 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 LRRC72A6NJI9 287 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 MSI1O43347 362 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 PPM1BO75688 479 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 MTHFD1P11586 935 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 HLA-EP13747 358 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 CD86P42081 329 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 FAM91A1Q658Y4 838 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 TSEN15Q8WW01 171 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 STAMBPL1Q96FJ0 436 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 MIEF1Q9NQG6 463 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 CFAP20Q9Y6A4 193 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 SCAF11Q99590 1463 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 MED23Q9ULK4 1368 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 PTGES3LE9PB15 166 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 DNALI1O14645 258 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 CDH3P22223 829 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 PSMA3P25788 255 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 DPP4P27487 766 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 C1DQ13901 141 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 TEDDM1Q5T9Z0 273 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 TTC7BQ86TV6 843 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 APOBEC3FQ8IUX4 373 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 SFRP1Q8N474 314 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 VPS35Q96QK1 796 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 WDR24Q96S15 920 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 SSX3Q99909 188 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 TSSK1BQ9BXA7 367 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 SEC61A2Q9H9S3 476 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ABCB10Q9NRK6 738 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 PLA2G6O60733 806 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 CYP2E1P05181 493 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 IGFALSP35858 605 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 SLC45A4Q5BKX6 768 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 NOMO2Q5JPE7 1267 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 SLX4IPQ5VYV7 408 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ARMC8Q8IUR7 673 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 NLNQ9BYT8 704 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 FZD3Q9NPG1 666 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 VANGL2Q9ULK5 521 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 KDM6BO15054 1643 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 SH3PXD2BA1X283 911 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 CFAP73A6NFT4 308 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 BRINP1O60477 761 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 DEAF1O75398 565 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 INSRRP14616 1297 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 OTX2P32243 289 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 PLA1AQ53H76 456 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ATXN7L2Q5T6C5 722 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 TRIM65Q6PJ69 517 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 TMEM26Q6ZUK4 368 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ZC3H10Q96K80 434 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF578Q96N58 590 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 KIF2CQ99661 725 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 DPYSL5Q9BPU6 564 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 MYMKA6NI61 221 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 TRIM38O00635 465 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 EXTL3O43909 919 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 PEPDP12955 493 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 BST2Q10589 180 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 TAB1Q15750 504 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 LRRC20Q8TCA0 184 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ESAMQ96AP7 390 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 PHF12Q96QT6 1004 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 PRDM12Q9H4Q4 367 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 STK17AQ9UEE5 414 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ASF1AQ9Y294 204 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 DGKBQ9Y6T7 804 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ERCC6L2Q5T890 1561 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms