RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.3□□□□□ -1.08
ACTN1-212ENST00000554158 AKAP7Q9P0M2 348 aaPredicted RBP8.3□□□□□ -1.08
ACTN1-212ENST00000554158 IL17BQ9UHF5 180 aa8.3□□□□□ -1.08
ACTN1-212ENST00000554158 ATXN7L1Q9ULK2 861 aaPredicted RBP8.3□□□□□ -1.08
ACTN1-212ENST00000554158 PADI4Q9UM07 663 aa8.3□□□□□ -1.08
ACTN1-212ENST00000554158 CTNND2Q9UQB3 1225 aa8.3□□□□□ -1.08
ACTN1-212ENST00000554158 COL27A1Q8IZC6 1860 aaPredicted RBP8.3□□□□□ -1.08
ACTN1-212ENST00000554158 IGLON5A6NGN9 336 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 CDRT15L2A8MXV6 281 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 KRIT1O00522 736 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 PLD2O14939 933 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 SMAD6O43541 496 aaKnown RBP8.29□□□□□ -1.08
ACTN1-212ENST00000554158 LZTS3O60299 673 aaPredicted RBP8.29□□□□□ -1.08
ACTN1-212ENST00000554158 CNTN5O94779 1100 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 GIMD1P0DJR0 217 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 SLC5A2P31639 672 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 SERPINH1P50454 418 aaKnown RBP8.29□□□□□ -1.08
ACTN1-212ENST00000554158 CCNHP51946 323 aaPredicted RBP8.29□□□□□ -1.08
ACTN1-212ENST00000554158 SNRPD1P62314 119 aaKnown RBP8.29□□□□□ -1.08
ACTN1-212ENST00000554158 YPEL5P62699 121 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 SLC6A3Q01959 620 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 CLN3Q13286 438 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 C1orf61Q13536 156 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 ISM2Q6H9L7 571 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 ZNF783Q6ZMS7 281 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 FAM183BPQ6ZVS7 135 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 RAB11FIP2Q7L804 512 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 CLEC14AQ86T13 490 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 VPS36Q86VN1 386 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 FSTL5Q8N475 847 aaPredicted RBP8.29□□□□□ -1.08
ACTN1-212ENST00000554158 PAF1Q8N7H5 531 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 C1orf131Q8NDD1 294 aaKnown RBP8.29□□□□□ -1.08
ACTN1-212ENST00000554158 OR6C4Q8NGE1 309 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 OR52K2Q8NGK3 314 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 NELFBQ8WX92 580 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 LIN37Q96GY3 246 aaPredicted RBP8.29□□□□□ -1.08
ACTN1-212ENST00000554158 BMFQ96LC9 184 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 KREMEN1Q96MU8 473 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 LENG8Q96PV6 779 aaPredicted RBP8.29□□□□□ -1.08
ACTN1-212ENST00000554158 CPXM1Q96SM3 734 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 TM6SF2Q9BZW4 377 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 TRIM4Q9C037 500 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 SIRPGQ9P1W8 387 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 HECAQ9UBI9 543 aaPredicted RBP8.29□□□□□ -1.08
ACTN1-212ENST00000554158 CNTN6Q9UQ52 1028 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 OR51B4Q9Y5P0 310 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 FADS3Q9Y5Q0 445 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 LRP4O75096 1905 aa8.29□□□□□ -1.08
ACTN1-212ENST00000554158 A0A0D9SEW6 157 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 LY6G6EA0A0G2JKS1 128 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 ILVBLA1L0T0 632 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 TMEM110-MUSTN1A8MSY1 372 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 LMO7DNF2Z398 122 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 C3orf80F5H4A9 247 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 TOR1BO14657 336 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 ZW10O43264 779 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 PPFIA2O75334 1257 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 TM7SF2O76062 418 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 ITGB2P05107 769 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 LIPCP11150 499 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 IRAK1P51617 712 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 ARL13BQ3SXY8 428 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 C5orf22Q49AR2 442 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 ALFQ53S48 1182 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 ZNF805Q5CZA5 627 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 PERM1Q5SV97 790 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 CFAP58Q5T655 872 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 TMEM164Q5U3C3 297 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 GBP6Q6ZN66 633 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 PARS2Q7L3T8 475 aaKnown RBP8.28□□□□□ -1.08
ACTN1-212ENST00000554158 SLC26A9Q7LBE3 791 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 RD3Q7Z3Z2 195 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 TTC7BQ86TV6 843 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 GKN2Q86XP6 184 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 HID1Q8IV36 788 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 SLC35F3Q8IY50 421 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 DRC7Q8IY82 874 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 RBFAQ8N0V3 343 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 FMR1NBQ8N0W7 255 aaPredicted RBP8.28□□□□□ -1.08
ACTN1-212ENST00000554158 ARL10Q8N8L6 244 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 OR7D4Q8NG98 312 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 LMO3Q8TAP4 145 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 ASB12Q8WXK4 309 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 PRR11Q96HE9 360 aaPredicted RBP8.28□□□□□ -1.08
ACTN1-212ENST00000554158 TBATAQ96M53 351 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 PSMB7Q99436 277 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 CRACR2AQ9BSW2 395 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 BOCQ9BWV1 1114 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 OSBPL1AQ9BXW6 950 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 CPEB1Q9BZB8 566 aaKnown RBP8.28□□□□□ -1.08
ACTN1-212ENST00000554158 ZYG11BQ9C0D3 744 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 PIGVQ9NUD9 493 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 ARHGEF38Q9NXL2 777 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 MPP6Q9NZW5 540 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 PISDQ9UG56 409 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 FCF1Q9Y324 198 aaKnown RBP8.28□□□□□ -1.08
ACTN1-212ENST00000554158 WASF2Q9Y6W5 498 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 U3KQA8 63 aa8.28□□□□□ -1.08
ACTN1-212ENST00000554158 C16orf96A6NNT2 1141 aa8.27□□□□□ -1.09
ACTN1-212ENST00000554158 RAD51BO15315 384 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms