RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 C5AR1P21730 350 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 MAT2AP31153 395 aaKnown RBP7.08□□□□□ -1.28
ATXN3-224ENST00000554040 NDST1P52848 882 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 CYP24A1Q07973 514 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 SRSF6Q13247 344 aaKnown RBP7.08□□□□□ -1.28
ATXN3-224ENST00000554040 CLCA4Q14CN2 919 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 KCNMB1Q16558 191 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 SNRNP35Q16560 246 aaKnown RBP7.08□□□□□ -1.28
ATXN3-224ENST00000554040 ZNF699Q32M78 642 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 ZNF667Q5HYK9 610 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 MPP7Q5T2T1 576 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 ADGRF1Q5T601 910 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 HIST2H2BCQ6DN03 193 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-224ENST00000554040 SCARA5Q6ZMJ2 495 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 C14orf80Q86SX3 495 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 PTRH1Q86Y79 214 aaKnown RBP7.08□□□□□ -1.28
ATXN3-224ENST00000554040 ZNF564Q8TBZ8 553 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-224ENST00000554040 FAM131CQ96AQ9 280 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 ARRDC3Q96B67 414 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 CYFIP2Q96F07 1278 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 MRGPRX3Q96LB0 322 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 MIPEPQ99797 713 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 KRTAP4-9Q9BYQ8 210 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 ACSL6Q9UKU0 697 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 SRPK3Q9UPE1 567 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 CA5BQ9Y2D0 317 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 PCDHGA7Q9Y5G6 932 aa7.08□□□□□ -1.28
ATXN3-224ENST00000554040 UTP20O75691 2785 aaKnown RBP7.08□□□□□ -1.28
ATXN3-224ENST00000554040 KIF26BQ2KJY2 2108 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 CCDC187A0A096LP49 1063 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-224ENST00000554040 EDDM13A0A1B0GTR0 161 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 CPED1A4D0V7 1026 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 EME2A4GXA9 379 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-224ENST00000554040 LRRC10BA6NIK2 292 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 TTC34A8MYJ7 566 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 SLC7A4O43246 635 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 STX6O43752 255 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 LATS1O95835 1130 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 ASLP04424 464 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 P4HA1P13674 534 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 SLC5A2P31639 672 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 HOXD13P35453 343 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 DRD3P35462 400 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 CASRP41180 1078 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 CSKP41240 450 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 PSMD8P48556 350 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 ZNF177Q13360 481 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-224ENST00000554040 MORC3Q14149 939 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 NCAPHQ15003 741 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 TGIF1Q15583 401 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 CDKN3Q16667 212 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 SKIDA1Q1XH10 827 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 POM121L1PQ3SYA9 428 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 WIPI1Q5MNZ9 446 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-224ENST00000554040 SFRP5Q5T4F7 317 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 RSRC2Q7L4I2 434 aaKnown RBP7.07□□□□□ -1.28
ATXN3-224ENST00000554040 HDXQ7Z353 690 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 TRIM69Q86WT6 500 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 STK40Q8N2I9 435 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 ARHGAP18Q8N392 663 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 MFSD4AQ8N468 514 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 ZNF557Q8N988 423 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-224ENST00000554040 TMEM145Q8NBT3 493 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 FIBINQ8TAL6 211 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 WFDC5Q8TCV5 224 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 EPSTI1Q96J88 318 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 ZSCAN31Q96LW9 406 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-224ENST00000554040 DUSP16Q9BY84 665 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 ADNPQ9H2P0 1102 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 CAAP1Q9H8G2 361 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 PANK4Q9NVE7 773 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 NCKIPSDQ9NZQ3 722 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 HMGXB4Q9UGU5 601 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 INTS6Q9UL03 887 aaKnown RBP7.07□□□□□ -1.28
ATXN3-224ENST00000554040 RP1P56715 2156 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 PLXNA2O75051 1894 aa7.07□□□□□ -1.28
ATXN3-224ENST00000554040 ITPR3Q14573 2671 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 PLRG1O43660 514 aaKnown RBP7.06□□□□□ -1.28
ATXN3-224ENST00000554040 TBL1XO60907 577 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 RTN2O75298 545 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 NEBLO76041 1014 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 CLSTN1O94985 981 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 KIF20AO95235 890 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 BMP15O95972 392 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 IL1BP01584 269 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 C4BPAP04003 597 aaKnown RBP7.06□□□□□ -1.28
ATXN3-224ENST00000554040 SRPRAP08240 638 aaKnown RBP7.06□□□□□ -1.28
ATXN3-224ENST00000554040 TRIM21P19474 475 aaKnown RBP7.06□□□□□ -1.28
ATXN3-224ENST00000554040 SGSHP51688 502 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 AP3M2P53677 418 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 YWHAGP61981 247 aaKnown RBP eCLIP7.06□□□□□ -1.28
ATXN3-224ENST00000554040 BIRC3Q13489 604 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 MLANAQ16655 118 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 SETMARQ53H47 684 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-224ENST00000554040 MANEAQ5SRI9 462 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 PIK3R6Q5UE93 754 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 CDKAL1Q5VV42 579 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 RRAGBQ5VZM2 374 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms