RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 ASTE1Q2TB18 679 aaPredicted RBP8.49□□□□□ -1.05
PSEN1-209ENST00000553855 CARD16Q5EG05 197 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 CFAP58Q5T655 872 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 SYT12Q8IV01 421 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 UMODL1-AS1Q8N2C9 162 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 HDDC3Q8N4P3 179 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 DEFB119Q8N690 84 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 SPC24Q8NBT2 197 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 OR52K2Q8NGK3 314 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 SLC35G2Q8TBE7 412 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.49□□□□□ -1.05
PSEN1-209ENST00000553855 UBXN4Q92575 508 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 PTPRN2Q92932 1015 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 SKA1Q96BD8 255 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 BTBD6Q96KE9 485 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 HSPA12BQ96MM6 686 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 ZNF830Q96NB3 372 aaPredicted RBP8.49□□□□□ -1.05
PSEN1-209ENST00000553855 PSMB7Q99436 277 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 BAG1Q99933 345 aaPredicted RBP8.49□□□□□ -1.05
PSEN1-209ENST00000553855 HEPHQ9BQS7 1158 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 CALN1Q9BXU9 219 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 MAK16Q9BXY0 300 aaKnown RBP8.49□□□□□ -1.05
PSEN1-209ENST00000553855 PACSIN1Q9BY11 444 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 ACE2Q9BYF1 805 aaPredicted RBP8.49□□□□□ -1.05
PSEN1-209ENST00000553855 MIR1-1HGQ9H1L0 117 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 MTG2Q9H4K7 406 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 CD248Q9HCU0 757 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 WSB2Q9NYS7 404 aaPredicted RBP8.49□□□□□ -1.05
PSEN1-209ENST00000553855 RCOR3Q9P2K3 495 aaPredicted RBP8.49□□□□□ -1.05
PSEN1-209ENST00000553855 UBA2Q9UBT2 640 aaPredicted RBP8.49□□□□□ -1.05
PSEN1-209ENST00000553855 IL36AQ9UHA7 158 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 FZD4Q9ULV1 537 aa8.49□□□□□ -1.05
PSEN1-209ENST00000553855 SLC7A4O43246 635 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 TNFRSF21O75509 655 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 FSBPO95073 299 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 MT-CO1P00395 513 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 IGLV3-19P01714 112 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 CFIP05156 583 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 SYPP08247 313 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 XPAP23025 273 aaPredicted RBP8.48□□□□□ -1.05
PSEN1-209ENST00000553855 POU4F2Q12837 409 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 SEMA3BQ13214 749 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 SERINC3Q13530 473 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 DPYSL2Q16555 572 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 CA9Q16790 459 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 DUOXA1Q1HG43 343 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 INO80DQ53TQ3 878 aaPredicted RBP8.48□□□□□ -1.05
PSEN1-209ENST00000553855 SLC45A4Q5BKX6 768 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.48□□□□□ -1.05
PSEN1-209ENST00000553855 PRR23CQ6ZRP0 262 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 BTLAQ7Z6A9 289 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 ADAT2Q7Z6V5 191 aaKnown RBP8.48□□□□□ -1.05
PSEN1-209ENST00000553855 KIAA1328Q86T90 577 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 FRMD1Q8N878 549 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 TMIEQ8NEW7 156 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 OR2T34Q8NGX1 318 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 OR14C36Q8NHC7 312 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 PIP4K2CQ8TBX8 421 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 FRS2Q8WU20 508 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 ISG20Q96AZ6 181 aaKnown RBP8.48□□□□□ -1.05
PSEN1-209ENST00000553855 HMCESQ96FZ2 354 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 ZNF419Q96HQ0 510 aaPredicted RBP8.48□□□□□ -1.05
PSEN1-209ENST00000553855 CELF6Q96J87 481 aaKnown RBP8.48□□□□□ -1.05
PSEN1-209ENST00000553855 LRIG1Q96JA1 1093 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 GDAP1L1Q96MZ0 367 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 PEBP4Q96S96 227 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 CINPQ9BW66 212 aaPredicted RBP8.48□□□□□ -1.05
PSEN1-209ENST00000553855 MAGEB5Q9BZ81 275 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 TM6SF2Q9BZW4 377 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 TNKS2Q9H2K2 1166 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 ZDHHC6Q9H6R6 413 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 NEUROD4Q9HD90 331 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 OSGEPQ9NPF4 335 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 DDX56Q9NY93 547 aaKnown RBP8.48□□□□□ -1.05
PSEN1-209ENST00000553855 CWC15Q9P013 229 aaKnown RBP8.48□□□□□ -1.05
PSEN1-209ENST00000553855 MBD1Q9UIS9 605 aaPredicted RBP8.48□□□□□ -1.05
PSEN1-209ENST00000553855 FOXD3Q9UJU5 478 aaPredicted RBP8.48□□□□□ -1.05
PSEN1-209ENST00000553855 NENFQ9UMX5 172 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 SLC6A14Q9UN76 642 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.48□□□□□ -1.05
PSEN1-209ENST00000553855 PCDHA13Q9Y5I0 950 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 EPN1Q9Y6I3 576 aaPredicted RBP8.48□□□□□ -1.05
PSEN1-209ENST00000553855 ATG2BQ96BY7 2078 aa8.48□□□□□ -1.05
PSEN1-209ENST00000553855 TBC1D3DA0A087WVF3 549 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 TBC1D3IA0A087WXS9 549 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 TBC1D3EA0A087X179 549 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 TBC1D3KA0A087X1G2 549 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 TBC1D3FA6NER0 549 aaPredicted RBP8.47□□□□□ -1.05
PSEN1-209ENST00000553855 TBC1D3LB9A6J9 549 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 K7ERQ8 282 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 KRIT1O00522 736 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 NEMP1O14524 444 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 SMAD6O43541 496 aaKnown RBP8.47□□□□□ -1.05
PSEN1-209ENST00000553855 PALMO75781 387 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 ZMPSTE24O75844 475 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 NDUFA10O95299 355 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 POP4O95707 220 aaKnown RBP8.47□□□□□ -1.05
PSEN1-209ENST00000553855 GSRP00390 522 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 TBC1D3HP0C7X1 549 aa8.47□□□□□ -1.05
PSEN1-209ENST00000553855 TNNT1P13805 278 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms