RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 PCDH20Q8N6Y1 951 aaKnown RBP7.01□□□□□ -1.29
LINC-ROR-201ENST00000553704 SCAMP5Q8TAC9 235 aa7.01□□□□□ -1.29
LINC-ROR-201ENST00000553704 SH3RF2Q8TEC5 729 aa7.01□□□□□ -1.29
LINC-ROR-201ENST00000553704 HEXDCQ8WVB3 486 aa7.01□□□□□ -1.29
LINC-ROR-201ENST00000553704 SREK1Q8WXA9 508 aaKnown RBP7.01□□□□□ -1.29
LINC-ROR-201ENST00000553704 ELMO2Q96JJ3 720 aa7.01□□□□□ -1.29
LINC-ROR-201ENST00000553704 BTBD9Q96Q07 612 aa7.01□□□□□ -1.29
LINC-ROR-201ENST00000553704 HAPLN3Q96S86 360 aa7.01□□□□□ -1.29
LINC-ROR-201ENST00000553704 CCDC28BQ9BUN5 200 aa7.01□□□□□ -1.29
LINC-ROR-201ENST00000553704 POMKQ9H5K3 350 aa7.01□□□□□ -1.29
LINC-ROR-201ENST00000553704 ZNF408Q9H9D4 720 aa7.01□□□□□ -1.29
LINC-ROR-201ENST00000553704 IGSF5Q9NSI5 407 aa7.01□□□□□ -1.29
LINC-ROR-201ENST00000553704 GTSE1Q9NYZ3 720 aa7.01□□□□□ -1.29
LINC-ROR-201ENST00000553704 C6orf203Q9P0P8 240 aaPredicted RBP7.01□□□□□ -1.29
LINC-ROR-201ENST00000553704 GMPR2Q9P2T1 348 aaKnown RBP7.01□□□□□ -1.29
LINC-ROR-201ENST00000553704 MID2Q9UJV3 735 aa7.01□□□□□ -1.29
LINC-ROR-201ENST00000553704 APPL1Q9UKG1 709 aa7.01□□□□□ -1.29
LINC-ROR-201ENST00000553704 AP4B1Q9Y6B7 739 aa7.01□□□□□ -1.29
LINC-ROR-201ENST00000553704 MAGEB16A2A368 324 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 CCL22O00626 93 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 MTSS1O43312 755 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 MAFKO60675 156 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 PMPCBO75439 489 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 RNASEH2AO75792 299 aaKnown RBP7□□□□□ -1.29
LINC-ROR-201ENST00000553704 STMN1P16949 149 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 BDNFP23560 247 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 SCNN1GP51170 649 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 C1QTNF8P60827 252 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 RALGDSQ12967 914 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 SEPT6Q14141 434 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 RBBP5Q15291 538 aaKnown RBP7□□□□□ -1.29
LINC-ROR-201ENST00000553704 PCBP1Q15365 356 aaKnown RBP eCLIP7□□□□□ -1.29
LINC-ROR-201ENST00000553704 PCID2Q5JVF3 399 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 IQSEC1Q6DN90 963 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 PELI3Q8N2H9 469 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 ATPAF2Q8N5M1 289 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 FAM110BQ8TC76 370 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 HASPINQ8TF76 798 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 NMD3Q96D46 503 aaKnown RBP7□□□□□ -1.29
LINC-ROR-201ENST00000553704 MAELQ96JY0 434 aaKnown RBP7□□□□□ -1.29
LINC-ROR-201ENST00000553704 CNBD2Q96M20 576 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 PRICKLE1Q96MT3 831 aaPredicted RBP7□□□□□ -1.29
LINC-ROR-201ENST00000553704 TSNARE1Q96NA8 513 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 TSGA13Q96PP4 275 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 VAT1Q99536 393 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 SLC39A8Q9C0K1 460 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 PCDHAC1Q9H158 963 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 TRPV6Q9H1D0 765 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 GLOD4Q9HC38 313 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 SPON1Q9HCB6 807 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 CLIC5Q9NZA1 410 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 NUDT5Q9UKK9 219 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 ACOT9Q9Y305 439 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 TCAF1Q9Y4C2 921 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 HAS3O00219 553 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 DENRO43583 198 aaKnown RBP7□□□□□ -1.29
LINC-ROR-201ENST00000553704 AP1G1O43747 822 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 STRNO43815 780 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 TADA2AO75478 443 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 BCAS2O75934 225 aaPredicted RBP7□□□□□ -1.29
LINC-ROR-201ENST00000553704 MT-CO1P00395 513 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 TFAP2AP05549 437 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 MYL3P08590 195 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 FGFR3P22607 806 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 ADRA1AP35348 466 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 CRYBB1P53674 252 aaPredicted RBP7□□□□□ -1.29
LINC-ROR-201ENST00000553704 CSHL1Q14406 222 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 PRPSAP1Q14558 356 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 HERC3Q15034 1050 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 PCSK7Q16549 785 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 TIGD5Q53EQ6 642 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 RARS2Q5T160 578 aaKnown RBP7□□□□□ -1.29
LINC-ROR-201ENST00000553704 MAP3K21Q5TCX8 1036 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 TRIM67Q6ZTA4 783 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 RNF135Q8IUD6 432 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 GALNT4Q8N4A0 578 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 TMEM102Q8N9M5 508 aaPredicted RBP7□□□□□ -1.29
LINC-ROR-201ENST00000553704 RNF34Q969K3 372 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 ATP6V1E2Q96A05 226 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 SLC10A4Q96EP9 437 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 SMARCD1Q96GM5 515 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 MRGPRX2Q96LB1 330 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 LRGUKQ96M69 825 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 FCRL5Q96RD9 977 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 SERPINI1Q99574 410 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 IL12RB2Q99665 862 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 MRPL46Q9H2W6 279 aaKnown RBP7□□□□□ -1.29
LINC-ROR-201ENST00000553704 DMAP1Q9NPF5 467 aaPredicted RBP7□□□□□ -1.29
LINC-ROR-201ENST00000553704 CHST12Q9NRB3 414 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 TREX1Q9NSU2 369 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 SFMBT1Q9UHJ3 866 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 VPS28Q9UK41 221 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 PCDHGA7Q9Y5G6 932 aa7□□□□□ -1.29
LINC-ROR-201ENST00000553704 TDRD15B5MCY1 1934 aaKnown RBP7□□□□□ -1.29
LINC-ROR-201ENST00000553704 UNCXA6NJT0 531 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 A8MT66 165 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 E7ENX8 843 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 F8W810 466 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 FBP2O00757 339 aa6.99□□□□□ -1.29
LINC-ROR-201ENST00000553704 VILLO15195 856 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms