RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 PDCD4Q53EL6 469 aaKnown RBP6.31□□□□□ -1.4
ATXN3-223ENST00000553686 WDR45BQ5MNZ6 344 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 EOGTQ5NDL2 527 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 LY6G5CQ5SRR4 150 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 STXBP5Q5T5C0 1151 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 FAM102AQ5T9C2 384 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-223ENST00000553686 METRNLQ641Q3 311 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 MED25Q71SY5 747 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 MIER3Q7Z3K6 550 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 ITIH5Q86UX2 942 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 CCDC33Q8N5R6 958 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 ZNF248Q8NDW4 579 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 TMEM143Q96AN5 459 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 MYEOVQ96EZ4 313 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 LGMNQ99538 433 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 C7orf25Q9BPX7 421 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 SH2D3AQ9BRG2 576 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 MLST8Q9BVC4 326 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 TEKT3Q9BXF9 490 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 TRIM4Q9C037 500 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 ECT2Q9H8V3 914 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 KIF9Q9HAQ2 790 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 HPS4Q9NQG7 708 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 TM7SF3Q9NS93 570 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 FBXL5Q9UKA1 691 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 ACTL7AQ9Y615 435 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 COL12A1Q99715 3063 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 GAGE12BA1L429 117 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 GAGE12HA6NDE8 117 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 hCG_1984214I3L0E3 225 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 PTGESO14684 152 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 CHMP2AO43633 222 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 PCDHGA12O60330 932 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 NDUFS2O75306 463 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 PRAMEF12O95522 483 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 ARF4P18085 180 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-223ENST00000553686 FPR1P21462 350 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 GABRR2P28476 465 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 MATKP42679 507 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 INHBCP55103 352 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 PSMC5P62195 406 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 GRIK2Q13002 908 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 CCDC157Q569K6 752 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 ZNF280DQ6N043 979 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 DHRS13Q6UX07 377 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 Q6ZPA2 131 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 DNAJB7Q7Z6W7 309 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-223ENST00000553686 TMC8Q8IU68 726 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 VRK3Q8IV63 474 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 CMTM8Q8IZV2 173 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 DEFB119Q8N690 84 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 ZNF713Q8N859 430 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-223ENST00000553686 FRMD1Q8N878 549 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 TRIML1Q8N9V2 468 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 APPL2Q8NEU8 664 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 OTUD7AQ8TE49 926 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-223ENST00000553686 HMGB4Q8WW32 186 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 ATP2A3Q93084 1043 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 FUBP3Q96I24 572 aaKnown RBP eCLIP6.3□□□□□ -1.4
ATXN3-223ENST00000553686 CEP170P1Q96L14 293 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 IKZF4Q9H2S9 585 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 DHX33Q9H6R0 707 aaKnown RBP6.3□□□□□ -1.4
ATXN3-223ENST00000553686 GAREM1Q9H706 876 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 MANSC1Q9H8J5 431 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 TDP1Q9NUW8 608 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 YIPF1Q9Y548 306 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 PCDHGA9Q9Y5G4 932 aaKnown RBP6.3□□□□□ -1.4
ATXN3-223ENST00000553686 PCDHGA8Q9Y5G5 932 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 PCDHGA7Q9Y5G6 932 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 PCDHGA6Q9Y5G7 932 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 PCDHGA3Q9Y5H0 932 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 TICRRQ7Z2Z1 1910 aa6.3□□□□□ -1.4
ATXN3-223ENST00000553686 LRRK2Q5S007 2527 aa6.29□□□□□ -1.4
ATXN3-223ENST00000553686 A0A087X1B8 175 aa6.29□□□□□ -1.4
ATXN3-223ENST00000553686 A0A1B0GTW7 788 aa6.29□□□□□ -1.4
ATXN3-223ENST00000553686 hCG_1642624A0A1W2PR95 340 aa6.29□□□□□ -1.4
ATXN3-223ENST00000553686 TMEM191CA6NGB0 347 aa6.29□□□□□ -1.4
ATXN3-223ENST00000553686 ALG1L2C9J202 215 aa6.29□□□□□ -1.4
ATXN3-223ENST00000553686 STBD1O95210 358 aa6.29□□□□□ -1.4
ATXN3-223ENST00000553686 PLEKHA8P1O95397 391 aa6.29□□□□□ -1.4
ATXN3-223ENST00000553686 AMY1AP04745 511 aa6.29□□□□□ -1.4
ATXN3-223ENST00000553686 ARSAP15289 507 aa6.29□□□□□ -1.4
ATXN3-223ENST00000553686 KRT4P19013 534 aa6.29□□□□□ -1.4
ATXN3-223ENST00000553686 U2AF2P26368 475 aaKnown RBP eCLIP6.29□□□□□ -1.4
ATXN3-223ENST00000553686 PCSK1P29120 753 aa6.29□□□□□ -1.4
ATXN3-223ENST00000553686 MARCKSP29966 332 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-223ENST00000553686 CIITAP33076 1130 aa6.29□□□□□ -1.4
ATXN3-223ENST00000553686 WASP42768 502 aa6.29□□□□□ -1.4
ATXN3-223ENST00000553686 GRK6P43250 576 aa6.29□□□□□ -1.4
ATXN3-223ENST00000553686 BRCC3P46736 316 aa6.29□□□□□ -1.4
ATXN3-223ENST00000553686 CLCNKBP51801 687 aa6.29□□□□□ -1.4
ATXN3-223ENST00000553686 VEPH1Q14D04 833 aa6.29□□□□□ -1.4
ATXN3-223ENST00000553686 PCBP2Q15366 365 aaKnown RBP eCLIP6.29□□□□□ -1.4
ATXN3-223ENST00000553686 NAB2Q15742 525 aa6.29□□□□□ -1.4
ATXN3-223ENST00000553686 TAF12Q16514 161 aa6.29□□□□□ -1.4
ATXN3-223ENST00000553686 UPP1Q16831 310 aa6.29□□□□□ -1.4
ATXN3-223ENST00000553686 LRCH2Q5VUJ6 765 aa6.29□□□□□ -1.4
ATXN3-223ENST00000553686 JAKMIP3Q5VZ66 844 aa6.29□□□□□ -1.4
ATXN3-223ENST00000553686 ANO5Q75V66 913 aa6.29□□□□□ -1.4
ATXN3-223ENST00000553686 OTUD6AQ7L8S5 288 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms