RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 OSBPL1AQ9BXW6 950 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 MRPL46Q9H2W6 279 aaKnown RBP13.07□□□□□ -0.32
SHMT2-205ENST00000553474 C11orf49Q9H6J7 331 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 RBM22Q9NW64 420 aaKnown RBP eCLIP13.07□□□□□ -0.328e-10■■■■■ 40.7
SHMT2-205ENST00000553474 UBP1Q9NZI7 540 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 NCKIPSDQ9NZQ3 722 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 BCAP29Q9UHQ4 241 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 CDH22Q9UJ99 828 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 SNX10Q9Y5X0 201 aa13.07□□□□□ -0.32
SHMT2-205ENST00000553474 FAM95CA0A1B0GW59 222 aa13.06□□□□□ -0.32
SHMT2-205ENST00000553474 RGSL1A5PLK6 1076 aa13.06□□□□□ -0.32
SHMT2-205ENST00000553474 DCXO43602 365 aa13.06□□□□□ -0.32
SHMT2-205ENST00000553474 RHOQP17081 205 aa13.06□□□□□ -0.32
SHMT2-205ENST00000553474 SLC26A3P40879 764 aa13.06□□□□□ -0.32
SHMT2-205ENST00000553474 GRIA4P48058 902 aa13.06□□□□□ -0.32
SHMT2-205ENST00000553474 CD151P48509 253 aa13.06□□□□□ -0.32
SHMT2-205ENST00000553474 TUBP50607 506 aa13.06□□□□□ -0.32
SHMT2-205ENST00000553474 SATB1Q01826 763 aa13.06□□□□□ -0.32
SHMT2-205ENST00000553474 KLF10Q13118 480 aa13.06□□□□□ -0.32
SHMT2-205ENST00000553474 LAMB3Q13751 1172 aa13.06□□□□□ -0.32
SHMT2-205ENST00000553474 BTG3Q14201 252 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-205ENST00000553474 LPIN1Q14693 890 aa13.06□□□□□ -0.32
SHMT2-205ENST00000553474 HERC3Q15034 1050 aa13.06□□□□□ -0.32
SHMT2-205ENST00000553474 ARTNQ5T4W7 220 aa13.06□□□□□ -0.32
SHMT2-205ENST00000553474 CAPRIN2Q6IMN6 1127 aaKnown RBP13.06□□□□□ -0.32
SHMT2-205ENST00000553474 LRRC8EQ6NSJ5 796 aa13.06□□□□□ -0.32
SHMT2-205ENST00000553474 C16orf89Q6UX73 402 aa13.06□□□□□ -0.32
SHMT2-205ENST00000553474 ATG14Q6ZNE5 492 aa13.06□□□□□ -0.32
SHMT2-205ENST00000553474 CENPLQ8N0S6 344 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-205ENST00000553474 FSTL5Q8N475 847 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-205ENST00000553474 SPATA22Q8NHS9 363 aa13.06□□□□□ -0.32
SHMT2-205ENST00000553474 MICAL1Q8TDZ2 1067 aa13.06□□□□□ -0.32
SHMT2-205ENST00000553474 CASP10Q92851 521 aa13.06□□□□□ -0.32
SHMT2-205ENST00000553474 PEX13Q92968 403 aa13.06□□□□□ -0.32
SHMT2-205ENST00000553474 FAR2Q96K12 515 aa13.06□□□□□ -0.32
SHMT2-205ENST00000553474 NR1H4Q96RI1 486 aaPredicted RBP13.06□□□□□ -0.32
SHMT2-205ENST00000553474 FICDQ9BVA6 458 aa13.06□□□□□ -0.32
SHMT2-205ENST00000553474 TRPV6Q9H1D0 765 aa13.06□□□□□ -0.32
SHMT2-205ENST00000553474 TRMT13Q9NUP7 481 aaKnown RBP13.06□□□□□ -0.32
SHMT2-205ENST00000553474 IPO11Q9UI26 975 aaKnown RBP13.06□□□□□ -0.32
SHMT2-205ENST00000553474 VPS28Q9UK41 221 aa13.06□□□□□ -0.32
SHMT2-205ENST00000553474 TRPC5OSA6NMA1 111 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 PQBP1O60828 265 aaKnown RBP13.05□□□□□ -0.32
SHMT2-205ENST00000553474 VAPBO95292 243 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 MT-CYBP00156 380 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-205ENST00000553474 HOXB8P17481 243 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-205ENST00000553474 TFEBP19484 476 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 MAGEA11P43364 429 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 SLC12A2P55011 1212 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 MTTPP55157 894 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 RPL26P61254 145 aaKnown RBP13.05□□□□□ -0.32
SHMT2-205ENST00000553474 SLC25A3Q00325 362 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 DSG1Q02413 1049 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 GALNT1Q10472 559 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-205ENST00000553474 USP4Q13107 963 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 POU6F1Q14863 301 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 GLB1LQ6UWU2 654 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 FAM43BQ6ZT52 329 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-205ENST00000553474 SCD5Q86SK9 330 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 NUP93Q8N1F7 819 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 FBXW8Q8N3Y1 598 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 AFAP1L2Q8N4X5 818 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 DTX3LQ8TDB6 740 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 USP33Q8TEY7 942 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 TSPAN17Q96FV3 270 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 SLC39A13Q96H72 371 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 SCYL1Q96KG9 808 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 MRGPRX2Q96LB1 330 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 ZCWPW1Q9H0M4 648 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 S100A14Q9HCY8 104 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 ATP13A1Q9HD20 1204 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 OLA1Q9NTK5 396 aaKnown RBP13.05□□□□□ -0.32
SHMT2-205ENST00000553474 TMEM248Q9NWD8 314 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 MAGED2Q9UNF1 606 aaPredicted RBP13.05□□□□□ -0.32
SHMT2-205ENST00000553474 RUVBL2Q9Y230 463 aaKnown RBP13.05□□□□□ -0.32
SHMT2-205ENST00000553474 SSX2IPQ9Y2D8 614 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 MYLKQ15746 1914 aa13.05□□□□□ -0.32
SHMT2-205ENST00000553474 TK2O00142 265 aa13.04□□□□□ -0.32
SHMT2-205ENST00000553474 ARVCFO00192 962 aa13.04□□□□□ -0.32
SHMT2-205ENST00000553474 PENKP01210 267 aaPredicted RBP13.04□□□□□ -0.32
SHMT2-205ENST00000553474 HLA-DQB2P05538 268 aa13.04□□□□□ -0.32
SHMT2-205ENST00000553474 SBK3P0C264 359 aa13.04□□□□□ -0.32
SHMT2-205ENST00000553474 ARNTP27540 789 aa13.04□□□□□ -0.32
SHMT2-205ENST00000553474 GABRB3P28472 473 aa13.04□□□□□ -0.32
SHMT2-205ENST00000553474 PPARGP37231 505 aaPredicted RBP13.04□□□□□ -0.32
SHMT2-205ENST00000553474 LEPRP48357 1165 aaKnown RBP13.04□□□□□ -0.32
SHMT2-205ENST00000553474 PAPOLAP51003 745 aaKnown RBP13.04□□□□□ -0.32
SHMT2-205ENST00000553474 CLCN5P51795 746 aa13.04□□□□□ -0.32
SHMT2-205ENST00000553474 SLC14A2Q15849 920 aa13.04□□□□□ -0.32
SHMT2-205ENST00000553474 FAM83EQ2M2I3 478 aa13.04□□□□□ -0.32
SHMT2-205ENST00000553474 SLC9B1Q4ZJI4 515 aa13.04□□□□□ -0.32
SHMT2-205ENST00000553474 ARL13AQ5H913 290 aaPredicted RBP13.04□□□□□ -0.32
SHMT2-205ENST00000553474 ARHGAP36Q6ZRI8 547 aa13.04□□□□□ -0.32
SHMT2-205ENST00000553474 TMC7Q7Z402 723 aa13.04□□□□□ -0.32
SHMT2-205ENST00000553474 NECAB2Q7Z6G3 386 aa13.04□□□□□ -0.32
SHMT2-205ENST00000553474 IMP4Q96G21 291 aaKnown RBP13.04□□□□□ -0.32
SHMT2-205ENST00000553474 RETREG1Q9H6L5 497 aa13.04□□□□□ -0.32
SHMT2-205ENST00000553474 TRPC7Q9HCX4 862 aa13.04□□□□□ -0.32
SHMT2-205ENST00000553474 RGS18Q9NS28 235 aa13.04□□□□□ -0.32
SHMT2-205ENST00000553474 CLIC5Q9NZA1 410 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms