RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 C5orf22Q49AR2 442 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 CARD16Q5EG05 197 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 C3orf38Q5JPI3 329 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 NAA35Q5VZE5 725 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 ZCCHC8Q6NZY4 707 aaKnown RBP10.09□□□□□ -0.79
ACTN1-208ENST00000553370 KYAT3Q6YP21 454 aaKnown RBP10.09□□□□□ -0.79
ACTN1-208ENST00000553370 ZSCAN30Q86W11 494 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 XYLT1Q86Y38 959 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 ANKMY2Q8IV38 441 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 SPACA3Q8IXA5 215 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 SLC25A45Q8N413 288 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 MLKLQ8NB16 471 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 ZNF548Q8NEK5 533 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-208ENST00000553370 OR6K2Q8NGY2 324 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 LMX1AQ8TE12 382 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 KCNE4Q8WWG9 221 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 RFFLQ8WZ73 363 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 ARHGEF26Q96DR7 871 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 IFT43Q96FT9 208 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 CFAP57Q96MR6 1250 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 ZNF578Q96N58 590 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-208ENST00000553370 NCAPGQ9BPX3 1015 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 TUBGCP2Q9BSJ2 902 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 C1QTNF7Q9BXJ2 289 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 NDST4Q9H3R1 872 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 PRORYQ9H606 182 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 PRDM9Q9NQV7 894 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 TMPRSS4Q9NRS4 437 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 THSD1Q9NS62 852 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 HECAQ9UBI9 543 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-208ENST00000553370 AJAP1Q9UKB5 411 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-208ENST00000553370 RAI2Q9Y5P3 530 aa10.09□□□□□ -0.79
ACTN1-208ENST00000553370 ZFC3H1O60293 1989 aaKnown RBP10.08□□□□□ -0.8
ACTN1-208ENST00000553370 K7ESM1 405 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 SCAMP1O15126 338 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 AQP9O43315 295 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 PAK4O96013 591 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-208ENST00000553370 UGT2B4P06133 528 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 GP1BAP07359 652 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 MYF5P13349 255 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 DESP17661 470 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 SDC4P31431 198 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 SCNN1AP37088 669 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 SNRPD1P62314 119 aaKnown RBP10.08□□□□□ -0.8
ACTN1-208ENST00000553370 RAD51Q06609 339 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 PTK2BQ14289 1009 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 SYCP1Q15431 976 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 NR0B2Q15466 257 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 DEFB133Q30KQ1 61 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 VWA3BQ502W6 1294 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 C2CD6Q53TS8 623 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 CFAP58Q5T655 872 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 OTUD1Q5VV17 481 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-208ENST00000553370 PARS2Q7L3T8 475 aaKnown RBP10.08□□□□□ -0.8
ACTN1-208ENST00000553370 EFL1Q7Z2Z2 1120 aaKnown RBP10.08□□□□□ -0.8
ACTN1-208ENST00000553370 ABI3BPQ7Z7G0 1075 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 VPS36Q86VN1 386 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 FAM71AQ8IYT1 594 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 SLC22A18ASQ8N1D0 253 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 CACTIN-AS1Q8N1I8 211 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 CXorf40AQ8TE69 158 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 BTN2A2Q8WVV5 523 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 CPA5Q8WXQ8 436 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 RAB7BQ96AH8 199 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 PGAP3Q96FM1 320 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-208ENST00000553370 C1orf74Q96LT6 269 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 HAPLN3Q96S86 360 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 SLC13A1Q9BZW2 595 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 SIX2Q9NPC8 291 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 ASH1LQ9NR48 2969 aaKnown RBP10.08□□□□□ -0.8
ACTN1-208ENST00000553370 SEPT11Q9NVA2 429 aaKnown RBP10.08□□□□□ -0.8
ACTN1-208ENST00000553370 SPASTQ9UBP0 616 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 APOBEC3BQ9UH17 382 aaKnown RBP10.08□□□□□ -0.8
ACTN1-208ENST00000553370 ZFR2Q9UPR6 939 aaKnown RBP10.08□□□□□ -0.8
ACTN1-208ENST00000553370 FHOD1Q9Y613 1164 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 HS3ST3A1Q9Y663 406 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 WASF2Q9Y6W5 498 aa10.08□□□□□ -0.8
ACTN1-208ENST00000553370 ANKRD62A6NC57 917 aa10.07□□□□□ -0.8
ACTN1-208ENST00000553370 POM121BA6NF01 834 aa10.07□□□□□ -0.8
ACTN1-208ENST00000553370 IGLON5A6NGN9 336 aa10.07□□□□□ -0.8
ACTN1-208ENST00000553370 DRGXA6NNA5 263 aa10.07□□□□□ -0.8
ACTN1-208ENST00000553370 C10orf142B7Z368 130 aa10.07□□□□□ -0.8
ACTN1-208ENST00000553370 MUSKO15146 869 aa10.07□□□□□ -0.8
ACTN1-208ENST00000553370 KLK10O43240 276 aa10.07□□□□□ -0.8
ACTN1-208ENST00000553370 TSPAN6O43657 245 aa10.07□□□□□ -0.8
ACTN1-208ENST00000553370 RAMP2O60895 175 aa10.07□□□□□ -0.8
ACTN1-208ENST00000553370 ANXA6P08133 673 aa10.07□□□□□ -0.8
ACTN1-208ENST00000553370 NME1P15531 152 aaKnown RBP10.07□□□□□ -0.8
ACTN1-208ENST00000553370 FLT3P36888 993 aa10.07□□□□□ -0.8
ACTN1-208ENST00000553370 MAPKAPK2P49137 400 aa10.07□□□□□ -0.8
ACTN1-208ENST00000553370 TLE3Q04726 772 aa10.07□□□□□ -0.8
ACTN1-208ENST00000553370 ARHGAP40Q5TG30 622 aa10.07□□□□□ -0.8
ACTN1-208ENST00000553370 FAXCQ5TGI0 409 aa10.07□□□□□ -0.8
ACTN1-208ENST00000553370 CRTC1Q6UUV9 634 aa10.07□□□□□ -0.8
ACTN1-208ENST00000553370 LEKR1Q6ZMV7 388 aa10.07□□□□□ -0.8
ACTN1-208ENST00000553370 RBM44Q6ZP01 1051 aaKnown RBP10.07□□□□□ -0.8
ACTN1-208ENST00000553370 ZNF605Q86T29 641 aa10.07□□□□□ -0.8
ACTN1-208ENST00000553370 EMC1Q8N766 993 aa10.07□□□□□ -0.8
ACTN1-208ENST00000553370 TBC1D31Q96DN5 1066 aa10.07□□□□□ -0.8
ACTN1-208ENST00000553370 GDAP1L1Q96MZ0 367 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms