RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 GRB14Q14449 540 aa5.41□□□□□ -1.54
ATXN3-218ENST00000553309 ZKSCAN8Q15776 578 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-218ENST00000553309 SHROOM1Q2M3G4 852 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-218ENST00000553309 SLC35G1Q2M3R5 365 aa5.41□□□□□ -1.54
ATXN3-218ENST00000553309 IZUMO3Q5VZ72 239 aa5.41□□□□□ -1.54
ATXN3-218ENST00000553309 IL31Q6EBC2 164 aa5.41□□□□□ -1.54
ATXN3-218ENST00000553309 ACSM6Q6P461 480 aa5.41□□□□□ -1.54
ATXN3-218ENST00000553309 FBXO38Q6PIJ6 1188 aa5.41□□□□□ -1.54
ATXN3-218ENST00000553309 PIK3AP1Q6ZUJ8 805 aa5.41□□□□□ -1.54
ATXN3-218ENST00000553309 IRF2BP2Q7Z5L9 587 aa5.41□□□□□ -1.54
ATXN3-218ENST00000553309 TTC30AQ86WT1 665 aa5.41□□□□□ -1.54
ATXN3-218ENST00000553309 ANKRD13BQ86YJ7 626 aa5.41□□□□□ -1.54
ATXN3-218ENST00000553309 OR52L2PQ8NGH6 319 aa5.41□□□□□ -1.54
ATXN3-218ENST00000553309 TBC1D22AQ8WUA7 517 aa5.41□□□□□ -1.54
ATXN3-218ENST00000553309 TRMT61AQ96FX7 289 aaKnown RBP5.41□□□□□ -1.54
ATXN3-218ENST00000553309 P2RY11Q96G91 374 aa5.41□□□□□ -1.54
ATXN3-218ENST00000553309 FCRL5Q96RD9 977 aa5.41□□□□□ -1.54
ATXN3-218ENST00000553309 SCNM1Q9BWG6 230 aa5.41□□□□□ -1.54
ATXN3-218ENST00000553309 SIRT4Q9Y6E7 314 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-218ENST00000553309 ZFYVE26Q68DK2 2539 aa5.41□□□□□ -1.54
ATXN3-218ENST00000553309 ZNF292O60281 2723 aa5.4□□□□□ -1.54
ATXN3-218ENST00000553309 LOC102724159A0A0B4J2E5 919 aa5.4□□□□□ -1.54
ATXN3-218ENST00000553309 RASA4BC9J798 803 aa5.4□□□□□ -1.54
ATXN3-218ENST00000553309 HNRNPDLO14979 420 aaKnown RBP5.4□□□□□ -1.54
ATXN3-218ENST00000553309 RASA4O43374 803 aa5.4□□□□□ -1.54
ATXN3-218ENST00000553309 PRC1O43663 620 aa5.4□□□□□ -1.54
ATXN3-218ENST00000553309 USP12O75317 370 aa5.4□□□□□ -1.54
ATXN3-218ENST00000553309 MATN1P21941 496 aa5.4□□□□□ -1.54
ATXN3-218ENST00000553309 HOXA7P31268 230 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-218ENST00000553309 THBS4P35443 961 aa5.4□□□□□ -1.54
ATXN3-218ENST00000553309 IDUAP35475 653 aa5.4□□□□□ -1.54
ATXN3-218ENST00000553309 CCNA1P78396 465 aa5.4□□□□□ -1.54
ATXN3-218ENST00000553309 MTA1Q13330 715 aa5.4□□□□□ -1.54
ATXN3-218ENST00000553309 HDAC1Q13547 482 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-218ENST00000553309 PWP2Q15269 919 aaKnown RBP5.4□□□□□ -1.54
ATXN3-218ENST00000553309 TRIM71Q2Q1W2 868 aaKnown RBP5.4□□□□□ -1.54
ATXN3-218ENST00000553309 AWAT2Q6E213 333 aa5.4□□□□□ -1.54
ATXN3-218ENST00000553309 KYAT3Q6YP21 454 aaKnown RBP5.4□□□□□ -1.54
ATXN3-218ENST00000553309 TMCO2Q7Z6W1 182 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-218ENST00000553309 RASGRP3Q8IV61 690 aa5.4□□□□□ -1.54
ATXN3-218ENST00000553309 UEVLDQ8IX04 471 aa5.4□□□□□ -1.54
ATXN3-218ENST00000553309 OR2C3Q8N628 320 aa5.4□□□□□ -1.54
ATXN3-218ENST00000553309 NEK9Q8TD19 979 aa5.4□□□□□ -1.54
ATXN3-218ENST00000553309 BCAS4Q8TDM0 211 aa5.4□□□□□ -1.54
ATXN3-218ENST00000553309 NAF1Q96HR8 494 aaKnown RBP5.4□□□□□ -1.54
ATXN3-218ENST00000553309 SENP7Q9BQF6 1050 aa5.4□□□□□ -1.54
ATXN3-218ENST00000553309 RNF26Q9BY78 433 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-218ENST00000553309 TSPYL1Q9H0U9 437 aa5.4□□□□□ -1.54
ATXN3-218ENST00000553309 FOXP1Q9H334 677 aaPredicted RBP5.4□□□□□ -1.54
ATXN3-218ENST00000553309 HIPK3Q9H422 1215 aa5.4□□□□□ -1.54
ATXN3-218ENST00000553309 ARNT2Q9HBZ2 717 aa5.4□□□□□ -1.54
ATXN3-218ENST00000553309 DDX4Q9NQI0 724 aaKnown RBP5.4□□□□□ -1.54
ATXN3-218ENST00000553309 HEY2Q9UBP5 337 aa5.4□□□□□ -1.54
ATXN3-218ENST00000553309 PHTF1Q9UMS5 762 aa5.4□□□□□ -1.54
ATXN3-218ENST00000553309 DMXL1Q9Y485 3027 aa5.4□□□□□ -1.55
ATXN3-218ENST00000553309 DMDP11532 3685 aa5.4□□□□□ -1.55
ATXN3-218ENST00000553309 MAPK8IP3Q9UPT6 1336 aa5.4□□□□□ -1.55
ATXN3-218ENST00000553309 MAST4O15021 2626 aa5.39□□□□□ -1.55
ATXN3-218ENST00000553309 C2CD4BA6NLJ0 364 aa5.39□□□□□ -1.55
ATXN3-218ENST00000553309 M0QZQ0 153 aa5.39□□□□□ -1.55
ATXN3-218ENST00000553309 PODXLO00592 558 aa5.39□□□□□ -1.55
ATXN3-218ENST00000553309 MYL1P05976 194 aa5.39□□□□□ -1.55
ATXN3-218ENST00000553309 ME1P48163 572 aa5.39□□□□□ -1.55
ATXN3-218ENST00000553309 ZNF84P51523 738 aa5.39□□□□□ -1.55
ATXN3-218ENST00000553309 NEK3P51956 506 aa5.39□□□□□ -1.55
ATXN3-218ENST00000553309 BACE1P56817 501 aa5.39□□□□□ -1.55
ATXN3-218ENST00000553309 RIPK4P57078 832 aa5.39□□□□□ -1.55
ATXN3-218ENST00000553309 MYBPC2Q14324 1141 aa5.39□□□□□ -1.55
ATXN3-218ENST00000553309 ZNF260Q3ZCT1 412 aa5.39□□□□□ -1.55
ATXN3-218ENST00000553309 CCDC181Q5TID7 509 aa5.39□□□□□ -1.55
ATXN3-218ENST00000553309 LDHAL6AQ6ZMR3 332 aa5.39□□□□□ -1.55
ATXN3-218ENST00000553309 RBM44Q6ZP01 1051 aaKnown RBP5.39□□□□□ -1.55
ATXN3-218ENST00000553309 DEFB128Q7Z7B8 93 aa5.39□□□□□ -1.55
ATXN3-218ENST00000553309 IGFBPL1Q8WX77 278 aa5.39□□□□□ -1.55
ATXN3-218ENST00000553309 PMM1Q92871 262 aa5.39□□□□□ -1.55
ATXN3-218ENST00000553309 PLEKHF1Q96S99 279 aa5.39□□□□□ -1.55
ATXN3-218ENST00000553309 TSPAN18Q96SJ8 248 aa5.39□□□□□ -1.55
ATXN3-218ENST00000553309 GATA5Q9BWX5 397 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-218ENST00000553309 RRAGDQ9NQL2 400 aaPredicted RBP5.39□□□□□ -1.55
ATXN3-218ENST00000553309 FNIP2Q9P278 1114 aa5.39□□□□□ -1.55
ATXN3-218ENST00000553309 SYNRGQ9UMZ2 1314 aa5.39□□□□□ -1.55
ATXN3-218ENST00000553309 SMCHD1A6NHR9 2005 aa5.38□□□□□ -1.55
ATXN3-218ENST00000553309 LY6G6EA0A0G2JKS1 128 aa5.38□□□□□ -1.55
ATXN3-218ENST00000553309 PNMA6EA0A0J9YXQ4 647 aa5.38□□□□□ -1.55
ATXN3-218ENST00000553309 SLC22A23A1A5C7 686 aa5.38□□□□□ -1.55
ATXN3-218ENST00000553309 PI4KAP2A4QPH2 592 aa5.38□□□□□ -1.55
ATXN3-218ENST00000553309 J3KTA2 159 aa5.38□□□□□ -1.55
ATXN3-218ENST00000553309 NPC1O15118 1278 aa5.38□□□□□ -1.55
ATXN3-218ENST00000553309 CTIFO43310 598 aaKnown RBP5.38□□□□□ -1.55
ATXN3-218ENST00000553309 ZNF500O60304 480 aaPredicted RBP5.38□□□□□ -1.55
ATXN3-218ENST00000553309 CNOT3O75175 753 aaKnown RBP5.38□□□□□ -1.55
ATXN3-218ENST00000553309 ENTPD3O75355 529 aa5.38□□□□□ -1.55
ATXN3-218ENST00000553309 ENO1P06733 434 aaKnown RBP5.38□□□□□ -1.55
ATXN3-218ENST00000553309 ST6GAL1P15907 406 aa5.38□□□□□ -1.55
ATXN3-218ENST00000553309 RPS6KB1P23443 525 aa5.38□□□□□ -1.55
ATXN3-218ENST00000553309 NDUFS1P28331 727 aa5.38□□□□□ -1.55
ATXN3-218ENST00000553309 HSPA7P48741 367 aa5.38□□□□□ -1.55
ATXN3-218ENST00000553309 CDK7P50613 346 aa5.38□□□□□ -1.55
ATXN3-218ENST00000553309 LMOD3Q0VAK6 560 aa5.38□□□□□ -1.55
ATXN3-218ENST00000553309 UBE4AQ14139 1066 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms