RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 LRRC31Q6UY01 552 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 USP53Q70EK8 1073 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 ENOSF1Q7L5Y1 443 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 RAB11FIP2Q7L804 512 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 VPS36Q86VN1 386 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 ZSCAN30Q86W11 494 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 DRC7Q8IY82 874 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 FBXO39Q8N4B4 442 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 WDR48Q8TAF3 677 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 SHC3Q92529 594 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 GLMNQ92990 594 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 CCDC74AQ96AQ1 378 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 VOPP1Q96AW1 172 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 CENPTQ96BT3 561 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 TBCBQ99426 244 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 SLC13A1Q9BZW2 595 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 SYNCQ9H7C4 482 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 STARD5Q9NSY2 213 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.23□□□□□ -0.93
SYNE2-209ENST00000553308 SIRPGQ9P1W8 387 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 HECAQ9UBI9 543 aaPredicted RBP9.23□□□□□ -0.93
SYNE2-209ENST00000553308 GULP1Q9UBP9 304 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 AJAP1Q9UKB5 411 aaPredicted RBP9.23□□□□□ -0.93
SYNE2-209ENST00000553308 STAP1Q9ULZ2 295 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 PCDHGA7Q9Y5G6 932 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 ATP6V1DQ9Y5K8 247 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 HECTD1Q9ULT8 2610 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 DOCK4Q8N1I0 1966 aa9.23□□□□□ -0.93
SYNE2-209ENST00000553308 A0A1W2PQM1 296 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 BICDL2A1A5D9 508 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 C16orf96A6NNT2 1141 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 D6RAR5 112 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 AGRPO00253 132 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 GJB6O95452 261 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 UGT2B4P06133 528 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 PNMA6AP0CW24 399 aaPredicted RBP9.22□□□□□ -0.93
SYNE2-209ENST00000553308 ITGB6P18564 788 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 SLC9A1P19634 815 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 ACVRL1P37023 503 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 PPP1R2P41236 205 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 CCL7P80098 99 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 GNA12Q03113 381 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 PTK2BQ14289 1009 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 ZNF805Q5CZA5 627 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 FAXCQ5TGI0 409 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 TRNP1Q6NT89 227 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 ESRP1Q6NXG1 681 aaKnown RBP9.22□□□□□ -0.93
SYNE2-209ENST00000553308 FOXR2Q6PJQ5 311 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 ZNF783Q6ZMS7 281 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 MACC1Q6ZN28 852 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 NYAP1Q6ZVC0 841 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 VASH2Q86V25 355 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 SDR16C5Q8N3Y7 309 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 RYBPQ8N488 228 aaPredicted RBP9.22□□□□□ -0.93
SYNE2-209ENST00000553308 ARL10Q8N8L6 244 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 PCDH19Q8TAB3 1148 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 ASB12Q8WXK4 309 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 NT5C3BQ969T7 300 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 RAB7BQ96AH8 199 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 SGF29Q96ES7 293 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 PGAP3Q96FM1 320 aaPredicted RBP9.22□□□□□ -0.93
SYNE2-209ENST00000553308 C1orf74Q96LT6 269 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 TBATAQ96M53 351 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 GFM1Q96RP9 751 aaKnown RBP9.22□□□□□ -0.93
SYNE2-209ENST00000553308 ARHGAP9Q9BRR9 750 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 SRRTQ9BXP5 876 aaKnown RBP9.22□□□□□ -0.93
SYNE2-209ENST00000553308 MBNL1Q9NR56 388 aaKnown RBP9.22□□□□□ -0.93
SYNE2-209ENST00000553308 RRN3Q9NYV6 651 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 PISDQ9UG56 409 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 ACSL6Q9UKU0 697 aa9.22□□□□□ -0.93
SYNE2-209ENST00000553308 SCN8AQ9UQD0 1980 aa9.21□□□□□ -0.93
SYNE2-209ENST00000553308 NAV2Q8IVL1 2488 aa9.21□□□□□ -0.93
SYNE2-209ENST00000553308 GOLGA6L4A6NEF3 574 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 BIN1O00499 593 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 KRIT1O00522 736 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 AREL1O15033 823 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 MMP20O60882 483 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 GNA14O95837 355 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 ITGB2P05107 769 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 RPLP0P05388 317 aaKnown RBP9.21□□□□□ -0.94
SYNE2-209ENST00000553308 ITIH2P19823 946 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 ITIH1P19827 911 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 FLT3P36888 993 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 EIF4A3P38919 411 aaKnown RBP9.21□□□□□ -0.94
SYNE2-209ENST00000553308 INHBCP55103 352 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 PPARDQ03181 441 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 SLC20A2Q08357 652 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 PAK1Q13153 545 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 EIF3IQ13347 325 aaKnown RBP9.21□□□□□ -0.94
SYNE2-209ENST00000553308 IRF4Q15306 451 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 ALG11Q2TAA5 492 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 SLC25A52Q3SY17 297 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 COLEC12Q5KU26 742 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 ATXN7L2Q5T6C5 722 aaPredicted RBP9.21□□□□□ -0.94
SYNE2-209ENST00000553308 FAM102AQ5T9C2 384 aaPredicted RBP9.21□□□□□ -0.94
SYNE2-209ENST00000553308 LEKR1Q6ZMV7 388 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 ATG14Q6ZNE5 492 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 SLC47A2Q86VL8 602 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 FAM131BQ86XD5 332 aa9.21□□□□□ -0.94
SYNE2-209ENST00000553308 TP53I13Q8NBR0 393 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms