RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 TMX2-CTNND1H3BSU7 103 aa12.5□□□□□ -0.41
HDAC7-230ENST00000552960 ATP6AP2O75787 350 aa12.5□□□□□ -0.41
HDAC7-230ENST00000552960 H6PDO95479 791 aa12.5□□□□□ -0.41
HDAC7-230ENST00000552960 ZNF26P17031 533 aaPredicted RBP12.5□□□□□ -0.41
HDAC7-230ENST00000552960 RABGGTBP53611 331 aa12.5□□□□□ -0.41
HDAC7-230ENST00000552960 PRKAA1Q13131 559 aa12.5□□□□□ -0.41
HDAC7-230ENST00000552960 CTBP1Q13363 440 aa12.5□□□□□ -0.41
HDAC7-230ENST00000552960 APOFQ13790 326 aa12.5□□□□□ -0.41
HDAC7-230ENST00000552960 IKBKEQ14164 716 aa12.5□□□□□ -0.41
HDAC7-230ENST00000552960 CYS1Q717R9 158 aa12.5□□□□□ -0.41
HDAC7-230ENST00000552960 TMEM102Q8N9M5 508 aaPredicted RBP12.5□□□□□ -0.41
HDAC7-230ENST00000552960 RNF139Q8WU17 664 aa12.5□□□□□ -0.41
HDAC7-230ENST00000552960 CDH23Q9H251 3354 aa12.5□□□□□ -0.41
HDAC7-230ENST00000552960 GPBP1L1Q9HC44 474 aaPredicted RBP12.5□□□□□ -0.41
HDAC7-230ENST00000552960 ZBTB26Q9HCK0 441 aa12.5□□□□□ -0.41
HDAC7-230ENST00000552960 EBF1Q9UH73 591 aa12.5□□□□□ -0.41
HDAC7-230ENST00000552960 PCDHGA4Q9Y5G9 962 aa12.5□□□□□ -0.41
HDAC7-230ENST00000552960 CITO14578 2027 aa12.5□□□□□ -0.41
HDAC7-230ENST00000552960 CLIC3O95833 236 aa12.5□□□□□ -0.41
HDAC7-230ENST00000552960 TSPAN8P19075 237 aa12.5□□□□□ -0.41
HDAC7-230ENST00000552960 ADAM17P78536 824 aa12.5□□□□□ -0.41
HDAC7-230ENST00000552960 PURAQ00577 322 aaKnown RBP12.5□□□□□ -0.41
HDAC7-230ENST00000552960 FAM187BQ17R55 369 aa12.5□□□□□ -0.41
HDAC7-230ENST00000552960 FSTL5Q8N475 847 aaPredicted RBP12.5□□□□□ -0.41
HDAC7-230ENST00000552960 SLC35F5Q8WV83 523 aa12.5□□□□□ -0.41
HDAC7-230ENST00000552960 PAIP1Q9H074 479 aaKnown RBP12.5□□□□□ -0.41
HDAC7-230ENST00000552960 PLK2Q9NYY3 685 aa12.5□□□□□ -0.41
HDAC7-230ENST00000552960 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.5□□□□□ -0.41
HDAC7-230ENST00000552960 SFMBT1Q9UHJ3 866 aa12.5□□□□□ -0.41
HDAC7-230ENST00000552960 PIN4Q9Y237 131 aaKnown RBP12.5□□□□□ -0.41
HDAC7-230ENST00000552960 NRCAMQ92823 1304 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 TRIM38O00635 465 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 GIPC1O14908 333 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 MPOP05164 745 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 UGT1A6P19224 532 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 NMBRP28336 390 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 CCND3P30281 292 aaPredicted RBP12.49□□□□□ -0.41
HDAC7-230ENST00000552960 ATICP31939 592 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 NAA20P61599 178 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 ESRRGP62508 458 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 PRPSAP1Q14558 356 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 ANKDD1AQ495B1 522 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 TMEM110Q86TL2 294 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 SETD3Q86TU7 594 aaPredicted RBP12.49□□□□□ -0.41
HDAC7-230ENST00000552960 TICAM1Q8IUC6 712 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 FAM110BQ8TC76 370 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 DLG3Q92796 817 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 DRC3Q9H069 523 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 ANK1P16157 1881 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 TCAF2A6NFQ2 919 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 M0QYT0 321 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 EEF2KO00418 725 aaKnown RBP12.49□□□□□ -0.41
HDAC7-230ENST00000552960 DPYSL4O14531 572 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 ZBTB24O43167 697 aaPredicted RBP12.49□□□□□ -0.41
HDAC7-230ENST00000552960 DDHD2O94830 711 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 MCF2P10911 925 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 GPR141Q7Z602 305 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 ZNF554Q86TJ5 538 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 PNPLA1Q8N8W4 532 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 ARRDC4Q8NCT1 418 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 NXNL1Q96CM4 212 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 AP5M1Q9H0R1 490 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 RNF186Q9NXI6 227 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 CIDEBQ9UHD4 219 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 PAIP2BQ9ULR5 123 aaKnown RBP12.49□□□□□ -0.41
HDAC7-230ENST00000552960 NME7Q9Y5B8 376 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 TRPM7Q96QT4 1865 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 RNF103-CHMP3A0A140T963 221 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 MBLAC1A4D2B0 266 aaPredicted RBP12.49□□□□□ -0.41
HDAC7-230ENST00000552960 C9JVG2 144 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 TIMM44O43615 452 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 IGHA2P01877 340 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 GNAO1P09471 354 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 GRIA3P42263 894 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 TRIM25Q14258 630 aaKnown RBP12.49□□□□□ -0.41
HDAC7-230ENST00000552960 ZNF280DQ6N043 979 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 TTC33Q6PID6 262 aaPredicted RBP12.49□□□□□ -0.41
HDAC7-230ENST00000552960 IFNLR1Q8IU57 520 aaPredicted RBP12.49□□□□□ -0.41
HDAC7-230ENST00000552960 OR9I1Q8NGQ6 314 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 GIPC3Q8TF64 312 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 THAP11Q96EK4 314 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 CHST12Q9NRB3 414 aa12.49□□□□□ -0.41
HDAC7-230ENST00000552960 COL1A2P08123 1366 aa12.48□□□□□ -0.41
HDAC7-230ENST00000552960 ACOT8O14734 319 aa12.48□□□□□ -0.41
HDAC7-230ENST00000552960 DLX3O60479 287 aa12.48□□□□□ -0.41
HDAC7-230ENST00000552960 DARSP14868 501 aaKnown RBP12.48□□□□□ -0.41
HDAC7-230ENST00000552960 ZNF23P17027 643 aa12.48□□□□□ -0.41
HDAC7-230ENST00000552960 SLC5A3P53794 718 aa12.48□□□□□ -0.41
HDAC7-230ENST00000552960 NAB1Q13506 487 aa12.48□□□□□ -0.41
HDAC7-230ENST00000552960 SNX17Q15036 470 aa12.48□□□□□ -0.41
HDAC7-230ENST00000552960 PPP1R3AQ16821 1122 aa12.48□□□□□ -0.41
HDAC7-230ENST00000552960 ZNF618Q5T7W0 954 aa12.48□□□□□ -0.41
HDAC7-230ENST00000552960 ERI1Q8IV48 349 aaKnown RBP12.48□□□□□ -0.41
HDAC7-230ENST00000552960 DENND6AQ8IWF6 608 aa12.48□□□□□ -0.41
HDAC7-230ENST00000552960 SLC2A14Q8TDB8 520 aa12.48□□□□□ -0.41
HDAC7-230ENST00000552960 PFDN4Q9NQP4 134 aa12.48□□□□□ -0.41
HDAC7-230ENST00000552960 CDC14AQ9UNH5 594 aa12.48□□□□□ -0.41
HDAC7-230ENST00000552960 GMEB1Q9Y692 573 aa12.48□□□□□ -0.41
HDAC7-230ENST00000552960 ZCWPW2A0A1B0GU75 182 aa12.48□□□□□ -0.41
HDAC7-230ENST00000552960 HEATR9A2RTY3 570 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms