RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 AP3B1O00203 1094 aa19.92■□□□□ 0.78
SSH1-209ENST00000551165 ZMPSTE24O75844 475 aa19.92■□□□□ 0.78
SSH1-209ENST00000551165 VAPBO95292 243 aa19.92■□□□□ 0.78
SSH1-209ENST00000551165 ITGA2BP08514 1039 aa19.92■□□□□ 0.78
SSH1-209ENST00000551165 TAC1P20366 129 aa19.92■□□□□ 0.78
SSH1-209ENST00000551165 GALNT3Q14435 633 aa19.92■□□□□ 0.78
SSH1-209ENST00000551165 ZKSCAN8Q15776 578 aaPredicted RBP19.92■□□□□ 0.78
SSH1-209ENST00000551165 LGSNQ5TDP6 509 aa19.92■□□□□ 0.78
SSH1-209ENST00000551165 STRA8Q7Z7C7 330 aa19.92■□□□□ 0.78
SSH1-209ENST00000551165 APCDD1Q8J025 514 aa19.92■□□□□ 0.78
SSH1-209ENST00000551165 TDRD5Q8NAT2 981 aaKnown RBP19.92■□□□□ 0.78
SSH1-209ENST00000551165 SH3RF2Q8TEC5 729 aa19.92■□□□□ 0.78
SSH1-209ENST00000551165 ALG14Q96F25 216 aa19.92■□□□□ 0.78
SSH1-209ENST00000551165 GCNAQ96QF7 691 aa19.92■□□□□ 0.78
SSH1-209ENST00000551165 PSKH2Q96QS6 385 aa19.92■□□□□ 0.78
SSH1-209ENST00000551165 TGS1Q96RS0 853 aaKnown RBP19.92■□□□□ 0.78
SSH1-209ENST00000551165 MGME1Q9BQP7 344 aa19.92■□□□□ 0.78
SSH1-209ENST00000551165 FGFR1OP2Q9NVK5 253 aa19.92■□□□□ 0.78
SSH1-209ENST00000551165 LSM7Q9UK45 103 aaKnown RBP19.92■□□□□ 0.78
SSH1-209ENST00000551165 LOC285095A0A1B0GVY8 99 aa19.92■□□□□ 0.78
SSH1-209ENST00000551165 SCNN1BP51168 640 aa19.92■□□□□ 0.78
SSH1-209ENST00000551165 UBE3AQ05086 875 aa19.92■□□□□ 0.78
SSH1-209ENST00000551165 PPHLN1Q8NEY8 458 aaKnown RBP19.92■□□□□ 0.78
SSH1-209ENST00000551165 FAM111AQ96PZ2 611 aa19.92■□□□□ 0.78
SSH1-209ENST00000551165 SMIM14Q96QK8 99 aa19.92■□□□□ 0.78
SSH1-209ENST00000551165 CINPQ9BW66 212 aaPredicted RBP19.92■□□□□ 0.78
SSH1-209ENST00000551165 SEPT3Q9UH03 358 aa19.92■□□□□ 0.78
SSH1-209ENST00000551165 RWDD3Q9Y3V2 267 aa19.92■□□□□ 0.78
SSH1-209ENST00000551165 KCTD3Q9Y597 815 aa19.92■□□□□ 0.78
SSH1-209ENST00000551165 E2F8A0AVK6 867 aa19.91■□□□□ 0.78
SSH1-209ENST00000551165 CCL22O00626 93 aa19.91■□□□□ 0.78
SSH1-209ENST00000551165 MT-CO1P00395 513 aa19.91■□□□□ 0.78
SSH1-209ENST00000551165 PIRTP0C851 137 aa19.91■□□□□ 0.78
SSH1-209ENST00000551165 ARCN1P48444 511 aaKnown RBP19.91■□□□□ 0.78
SSH1-209ENST00000551165 SERPINB9P50453 376 aa19.91■□□□□ 0.78
SSH1-209ENST00000551165 SERPINH1P50454 418 aaKnown RBP19.91■□□□□ 0.78
SSH1-209ENST00000551165 PGGT1BP53609 377 aa19.91■□□□□ 0.78
SSH1-209ENST00000551165 EPHA5P54756 1037 aa19.91■□□□□ 0.78
SSH1-209ENST00000551165 IL9RQ01113 521 aa19.91■□□□□ 0.78
SSH1-209ENST00000551165 ALKBH8Q96BT7 664 aaKnown RBP19.91■□□□□ 0.78
SSH1-209ENST00000551165 MAGEB18Q96M61 343 aa19.91■□□□□ 0.78
SSH1-209ENST00000551165 ZSWIM3Q96MP5 696 aa19.91■□□□□ 0.78
SSH1-209ENST00000551165 SRPK1Q96SB4 655 aaKnown RBP19.91■□□□□ 0.78
SSH1-209ENST00000551165 MYOFQ9NZM1 2061 aa19.91■□□□□ 0.78
SSH1-209ENST00000551165 TPP1O14773 563 aa19.91■□□□□ 0.78
SSH1-209ENST00000551165 ZWINTO95229 277 aa19.91■□□□□ 0.78
SSH1-209ENST00000551165 PTPN2P17706 415 aa19.91■□□□□ 0.78
SSH1-209ENST00000551165 GP5P40197 560 aa19.91■□□□□ 0.78
SSH1-209ENST00000551165 CDH18Q13634 790 aa19.91■□□□□ 0.78
SSH1-209ENST00000551165 FRG1Q14331 258 aaKnown RBP19.91■□□□□ 0.78
SSH1-209ENST00000551165 PPM1JQ5JR12 505 aa19.91■□□□□ 0.78
SSH1-209ENST00000551165 HHATQ5VTY9 493 aa19.91■□□□□ 0.78
SSH1-209ENST00000551165 GRASPQ7Z6J2 395 aaPredicted RBP19.91■□□□□ 0.78
SSH1-209ENST00000551165 DENND6AQ8IWF6 608 aa19.91■□□□□ 0.78
SSH1-209ENST00000551165 CMTM8Q8IZV2 173 aa19.91■□□□□ 0.78
SSH1-209ENST00000551165 NDUFAF2Q8N183 169 aa19.91■□□□□ 0.78
SSH1-209ENST00000551165 MTBPQ96DY7 904 aa19.91■□□□□ 0.78
SSH1-209ENST00000551165 HTATIP2Q9BUP3 242 aa19.91■□□□□ 0.78
SSH1-209ENST00000551165 TREX1Q9NSU2 369 aa19.91■□□□□ 0.78
SSH1-209ENST00000551165 VPS28Q9UK41 221 aa19.91■□□□□ 0.78
SSH1-209ENST00000551165 K7ERQ8 282 aa19.9■□□□□ 0.78
SSH1-209ENST00000551165 PRAMEF12O95522 483 aa19.9■□□□□ 0.78
SSH1-209ENST00000551165 CCNFP41002 786 aa19.9■□□□□ 0.78
SSH1-209ENST00000551165 ETV4P43268 484 aa19.9■□□□□ 0.78
SSH1-209ENST00000551165 CBX2Q14781 532 aaPredicted RBP19.9■□□□□ 0.78
SSH1-209ENST00000551165 ALG1LQ6GMV1 187 aa19.9■□□□□ 0.78
SSH1-209ENST00000551165 CMC1Q7Z7K0 106 aa19.9■□□□□ 0.78
SSH1-209ENST00000551165 MFN1Q8IWA4 741 aa19.9■□□□□ 0.78
SSH1-209ENST00000551165 USP13Q92995 863 aaPredicted RBP19.9■□□□□ 0.78
SSH1-209ENST00000551165 CPNE1Q99829 537 aa19.9■□□□□ 0.78
SSH1-209ENST00000551165 VPS51Q9UID3 782 aa19.9■□□□□ 0.78
SSH1-209ENST00000551165 MTO1Q9Y2Z2 717 aaKnown RBP19.9■□□□□ 0.78
SSH1-209ENST00000551165 COPEO14579 308 aa19.9■□□□□ 0.78
SSH1-209ENST00000551165 BUD23O43709 281 aaKnown RBP19.9■□□□□ 0.78
SSH1-209ENST00000551165 CR2P20023 1033 aa19.9■□□□□ 0.78
SSH1-209ENST00000551165 GABRB3P28472 473 aa19.9■□□□□ 0.78
SSH1-209ENST00000551165 MAGEA10P43363 369 aaPredicted RBP19.9■□□□□ 0.78
SSH1-209ENST00000551165 CDK18Q07002 472 aa19.9■□□□□ 0.78
SSH1-209ENST00000551165 DNAJC3Q13217 504 aa19.9■□□□□ 0.78
SSH1-209ENST00000551165 CTBP1Q13363 440 aa19.9■□□□□ 0.78
SSH1-209ENST00000551165 GPM6BQ13491 265 aa19.9■□□□□ 0.78
SSH1-209ENST00000551165 PTPRCAPQ14761 206 aa19.9■□□□□ 0.78
SSH1-209ENST00000551165 ING5Q8WYH8 240 aa19.9■□□□□ 0.78
SSH1-209ENST00000551165 RBBP8Q99708 897 aa19.9■□□□□ 0.78
SSH1-209ENST00000551165 ELAC2Q9BQ52 826 aaKnown RBP19.9■□□□□ 0.78
SSH1-209ENST00000551165 CAB39LQ9H9S4 337 aa19.9■□□□□ 0.78
SSH1-209ENST00000551165 SLCO1B3Q9NPD5 702 aa19.9■□□□□ 0.78
SSH1-209ENST00000551165 TXNDC16Q9P2K2 825 aa19.9■□□□□ 0.78
SSH1-209ENST00000551165 PRKAG3Q9UGI9 489 aa19.9■□□□□ 0.78
SSH1-209ENST00000551165 ARHGAP26Q9UNA1 814 aa19.9■□□□□ 0.78
SSH1-209ENST00000551165 CHKBQ9Y259 395 aa19.9■□□□□ 0.78
SSH1-209ENST00000551165 SZT2Q5T011 3432 aa19.89■□□□□ 0.77
SSH1-209ENST00000551165 TMCC1O94876 653 aa19.89■□□□□ 0.77
SSH1-209ENST00000551165 RB1P06400 928 aa19.89■□□□□ 0.77
SSH1-209ENST00000551165 BMP1P13497 986 aa19.89■□□□□ 0.77
SSH1-209ENST00000551165 NAB1Q13506 487 aa19.89■□□□□ 0.77
SSH1-209ENST00000551165 FSTL4Q6MZW2 842 aa19.89■□□□□ 0.77
SSH1-209ENST00000551165 ZNF449Q6P9G9 518 aa19.89■□□□□ 0.77
SSH1-209ENST00000551165 TIFABQ6ZNK6 161 aa19.89■□□□□ 0.77
SSH1-209ENST00000551165 FAM47EQ6ZV65 393 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms