RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 ADD3Q9UEY8 706 aaKnown RBP5.69□□□□□ -1.5
CPSF6-206ENST00000550987 SARDHQ9UL12 918 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 ZNF215Q9UL58 517 aaPredicted RBP5.69□□□□□ -1.5
CPSF6-206ENST00000550987 FZD4Q9ULV1 537 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 ST3GAL5Q9UNP4 418 aa5.69□□□□□ -1.5
CPSF6-206ENST00000550987 CACNA1SQ13698 1873 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 WDR27A2RRH5 827 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 CCDC151A5D8V7 595 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 PTGES3LE9PB15 166 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 CLIC1O00299 241 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 DSCR3O14972 297 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 AHCYL1O43865 530 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 HBP1O60381 514 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 HNRNPCL1O60812 293 aaKnown RBP5.68□□□□□ -1.5
CPSF6-206ENST00000550987 TSPAN9O75954 239 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 TJP3O95049 919 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 STARD3NLO95772 234 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 URODP06132 367 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 ARSAP15289 507 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 RRM1P23921 792 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 FPR3P25089 353 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 MAPK4P31152 587 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 HOXD12P35452 270 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 HOXD13P35453 343 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 ACTN2P35609 894 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 BLOC1S1P78537 153 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 SHC2P98077 582 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 FZD5Q13467 585 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 MFSD13AQ14CX5 517 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 PTPAQ15257 358 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 PRICKLE4Q2TBC4 344 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 FAM153CQ494X1 144 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 GLE1Q53GS7 698 aaKnown RBP5.68□□□□□ -1.5
CPSF6-206ENST00000550987 MTFR2Q6P444 385 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 TMEM65Q6PI78 240 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 Q6ZNX1 250 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 IKBIPQ70UQ0 350 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 GALNT5Q7Z7M9 940 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 MON1AQ86VX9 555 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 TMEM200AQ86VY9 491 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 BRSK2Q8IWQ3 736 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 LAS2Q8IYD9 372 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 SLC44A3Q8N4M1 653 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 TTC39CQ8N584 583 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 BEND2Q8NDZ0 799 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 C8orf49Q96NF6 230 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 ITPAQ9BY32 194 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 CIPCQ9C0C6 399 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 SMYD2Q9NRG4 433 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 ASNSD1Q9NWL6 643 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 TESMINQ9Y4I5 508 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 LYVE1Q9Y5Y7 322 aa5.68□□□□□ -1.5
CPSF6-206ENST00000550987 MYOM3Q5VTT5 1437 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 PRR23AA6NEV1 266 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 PER2O15055 1255 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 STRNO43815 780 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 PEX11BO96011 259 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 LAMP2P13473 410 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 ABCD1P33897 745 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 STAT6P42226 847 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 CCT8P50990 548 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 EIF3BP55884 814 aaKnown RBP5.67□□□□□ -1.5
CPSF6-206ENST00000550987 MRPS35P82673 323 aaKnown RBP5.67□□□□□ -1.5
CPSF6-206ENST00000550987 DDR1Q08345 913 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 CHAF1BQ13112 559 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 IL13RA2Q14627 380 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 GXYLT1Q4G148 440 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 UBAP2Q5T6F2 1119 aaKnown RBP5.67□□□□□ -1.5
CPSF6-206ENST00000550987 NAPRTQ6XQN6 538 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 SCN4BQ8IWT1 228 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 FAM9BQ8IZU0 186 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 TAGAPQ8N103 731 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 GHDCQ8N2G8 530 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 CAVIN3Q969G5 261 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 CALML4Q96GE6 196 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 CCDC17Q96LX7 622 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 MMS19Q96T76 1030 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 FSD1LQ9BXM9 530 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 RNF26Q9BY78 433 aaPredicted RBP5.67□□□□□ -1.5
CPSF6-206ENST00000550987 CYP4F11Q9HBI6 524 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 SLC2A4RGQ9NR83 387 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 SMPD4Q9NXE4 827 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 RELNP78509 3460 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 HECTD1Q9ULT8 2610 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 CFAP46Q8IYW2 2715 aa5.67□□□□□ -1.5
CPSF6-206ENST00000550987 FRYQ5TBA9 3013 aa5.66□□□□□ -1.5
CPSF6-206ENST00000550987 COL4A4P53420 1690 aaPredicted RBP5.66□□□□□ -1.5
CPSF6-206ENST00000550987 COL11A2P13942 1736 aaPredicted RBP5.66□□□□□ -1.5
CPSF6-206ENST00000550987 hCG_1807616A0A1W2PRN6 198 aa5.66□□□□□ -1.5
CPSF6-206ENST00000550987 H0YIZ8 118 aa5.66□□□□□ -1.5
CPSF6-206ENST00000550987 GCATO75600 419 aa5.66□□□□□ -1.5
CPSF6-206ENST00000550987 MBPP02686 304 aaPredicted RBP5.66□□□□□ -1.5
CPSF6-206ENST00000550987 GCP02774 474 aa5.66□□□□□ -1.5
CPSF6-206ENST00000550987 C1SP09871 688 aa5.66□□□□□ -1.5
CPSF6-206ENST00000550987 HKR1P10072 659 aa5.66□□□□□ -1.5
CPSF6-206ENST00000550987 IGFBP2P18065 325 aa5.66□□□□□ -1.5
CPSF6-206ENST00000550987 NDUFS1P28331 727 aa5.66□□□□□ -1.5
CPSF6-206ENST00000550987 PPARGP37231 505 aaPredicted RBP5.66□□□□□ -1.5
CPSF6-206ENST00000550987 RGS2P41220 211 aa5.66□□□□□ -1.5
CPSF6-206ENST00000550987 GRIA3P42263 894 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms