RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 ZC3H3Q8IXZ2 948 aaKnown RBP12.32□□□□□ -0.44
NR4A1-215ENST00000550557 TMPRSS4Q9NRS4 437 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 CHST7Q9NS84 486 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 CLIC5Q9NZA1 410 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 CRYL1Q9Y2S2 319 aa12.32□□□□□ -0.44
NR4A1-215ENST00000550557 PGAM1P18669 254 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 EN2P19622 333 aaPredicted RBP12.31□□□□□ -0.44
NR4A1-215ENST00000550557 LPOP22079 712 aaPredicted RBP12.31□□□□□ -0.44
NR4A1-215ENST00000550557 CDH4P55283 916 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 DNAL1Q4LDG9 190 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 TAF8Q7Z7C8 310 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 GPR135Q8IZ08 494 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 CYP4X1Q8N118 509 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 PCDHB18PQ96TA0 734 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 COPS8Q99627 209 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 NEUROG2Q9H2A3 272 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 LRRC19Q9H756 370 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 GKN1Q9NS71 199 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 TDP1Q9NUW8 608 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 STX18Q9P2W9 335 aaKnown RBP12.31□□□□□ -0.44
NR4A1-215ENST00000550557 SNX5Q9Y5X3 404 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 ASLP04424 464 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 CAPZA2P47755 286 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 FAM187BQ17R55 369 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 SLC26A11Q86WA9 606 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 IFNEQ86WN2 208 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 PCYOX1LQ8NBM8 494 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 ICA1LQ8NDH6 482 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 ABTB1Q969K4 478 aaPredicted RBP12.31□□□□□ -0.44
NR4A1-215ENST00000550557 NSL1Q96IY1 281 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 NECTIN4Q96NY8 510 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 CPXM1Q96SM3 734 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 ENO4A6NNW6 628 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 FKBP9O95302 570 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 MAT2AP31153 395 aaKnown RBP12.31□□□□□ -0.44
NR4A1-215ENST00000550557 LINGO4Q6UY18 593 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 FKBP9P1Q75LS8 142 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 SLC44A2Q8IWA5 706 aaPredicted RBP12.31□□□□□ -0.44
NR4A1-215ENST00000550557 SIPA1Q96FS4 1042 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 SHCBP1LQ9BZQ2 653 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 FANCEQ9HB96 536 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 WRAP73Q9P2S5 460 aaPredicted RBP12.31□□□□□ -0.44
NR4A1-215ENST00000550557 NCDNQ9UBB6 729 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 INSL5Q9Y5Q6 135 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 ZFP37Q9Y6Q3 630 aaPredicted RBP12.31□□□□□ -0.44
NR4A1-215ENST00000550557 ADGRA3Q8IWK6 1321 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 GOLGA8TH3BQL2 631 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 CNTFP26441 200 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 FLT3P36888 993 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 GP5P40197 560 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 INAVAQ3KP66 663 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 PCID2Q5JVF3 399 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 SPANXN3Q5MJ09 141 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 FAM43BQ6ZT52 329 aaPredicted RBP12.31□□□□□ -0.44
NR4A1-215ENST00000550557 DAW1Q8N136 415 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 HEPHQ9BQS7 1158 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 IL22Q9GZX6 179 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 RHBGQ9H310 441 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 GNPTGQ9UJJ9 305 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 C15orf41Q9Y2V0 281 aa12.31□□□□□ -0.44
NR4A1-215ENST00000550557 E9PAM4 449 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 H3BM21 787 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 SKAP2O75563 359 aaPredicted RBP12.3□□□□□ -0.44
NR4A1-215ENST00000550557 POP4O95707 220 aaKnown RBP12.3□□□□□ -0.44
NR4A1-215ENST00000550557 VIPP01282 170 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 AKT2P31751 481 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 VHLP40337 213 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 ALDH18A1P54886 795 aaKnown RBP12.3□□□□□ -0.44
NR4A1-215ENST00000550557 GNA12Q03113 381 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 CUL3Q13618 768 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 UAP1L1Q3KQV9 507 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 PMF1Q6P1K2 205 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 CAMKK1Q8N5S9 505 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 C10orf53Q8N6V4 93 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 ZBED3Q96IU2 234 aaPredicted RBP12.3□□□□□ -0.44
NR4A1-215ENST00000550557 ILKAPQ9H0C8 392 aaPredicted RBP12.3□□□□□ -0.44
NR4A1-215ENST00000550557 SFXN1Q9H9B4 322 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 IMP3Q9NV31 184 aaKnown RBP12.3□□□□□ -0.44
NR4A1-215ENST00000550557 CHCHD3Q9NX63 227 aaKnown RBP12.3□□□□□ -0.44
NR4A1-215ENST00000550557 KCNU1A8MYU2 1149 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 BTN3A1O00481 513 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 DNALI1O14645 258 aaPredicted RBP12.3□□□□□ -0.44
NR4A1-215ENST00000550557 RASGRP1O95267 797 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 MLNP12872 115 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 BMPR1AP36894 532 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 IL2P60568 153 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 GPR17Q13304 367 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 TMED1Q13445 227 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 QPCTQ16769 361 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 GALNTL6Q49A17 601 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 SLC26A9Q7LBE3 791 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 PATL1Q86TB9 770 aaKnown RBP12.3□□□□□ -0.44
NR4A1-215ENST00000550557 FBXO39Q8N4B4 442 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 REPS1Q96D71 796 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 ABHD8Q96I13 439 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 LPIN3Q9BQK8 851 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 GTPBP2Q9BX10 602 aaKnown RBP12.3□□□□□ -0.44
NR4A1-215ENST00000550557 ING2Q9H160 280 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 TNKS2Q9H2K2 1166 aa12.3□□□□□ -0.44
NR4A1-215ENST00000550557 ABCB8Q9NUT2 735 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms