RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 C11orf96Q7Z7L8 435 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 SLC22A9Q8IVM8 553 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 HERC6Q8IVU3 1022 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 ACMSDQ8TDX5 336 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 PSMG2Q969U7 264 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 ASPSCR1Q9BZE9 553 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 COPS7BQ9H9Q2 264 aaPredicted RBP15.15■□□□□ 0.02
CUX1-214ENST00000550008 FBXW11Q9UKB1 542 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 HBS1LQ9Y450 684 aaKnown RBP15.15■□□□□ 0.02
CUX1-214ENST00000550008 SMNDC1O75940 238 aaKnown RBP eCLIP15.15■□□□□ 0.021e-5■■□□□ 11.9
CUX1-214ENST00000550008 SLC2A4P14672 509 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 TMED1Q13445 227 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 BRMS1LQ5PSV4 323 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 UGT3A1Q6NUS8 523 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 PKN3Q6P5Z2 889 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 PIGWQ7Z7B1 504 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 YAF2Q8IY57 180 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 UROC1Q96N76 676 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 TTPALQ9BTX7 342 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 RHOJQ9H4E5 214 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 COPG2Q9UBF2 871 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 APPL1Q9UKG1 709 aa15.15■□□□□ 0.02
CUX1-214ENST00000550008 ACADSP16219 412 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 RANBP1P43487 201 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 BCL2L1Q07817 233 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 HSPA14Q0VDF9 509 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 IFNL1Q8IU54 200 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 FAM162AQ96A26 154 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 SYT11Q9BT88 431 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 SLC39A8Q9C0K1 460 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 MAF1Q9H063 256 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 COG4Q9H9E3 785 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 KIF17Q9P2E2 1029 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 RCOR3Q9P2K3 495 aaPredicted RBP15.14■□□□□ 0.01
CUX1-214ENST00000550008 PCDHB8Q9UN66 801 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 PCDHB12Q9Y5F1 795 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 EME2A4GXA9 379 aaPredicted RBP15.14■□□□□ 0.01
CUX1-214ENST00000550008 SYNCRIPO60506 623 aaKnown RBP15.14■□□□□ 0.01
CUX1-214ENST00000550008 USP1O94782 785 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 GJA5P36382 358 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 HALP42357 657 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 NAB1Q13506 487 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 ATP6AP1LQ52LC2 224 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 ARMC12Q5T9G4 340 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 ANKS3Q6ZW76 656 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 ARCQ7LC44 396 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 RBM15BQ8NDT2 890 aaKnown RBP15.14■□□□□ 0.01
CUX1-214ENST00000550008 RCN3Q96D15 328 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 MTFMTQ96DP5 389 aaKnown RBP15.14■□□□□ 0.01
CUX1-214ENST00000550008 CORO1BQ9BR76 489 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 CCDC134Q9H6E4 229 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 SPASTQ9UBP0 616 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 PCDHGC4Q9Y5F7 938 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 INPP4BO15327 924 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 ZNF23P17027 643 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 ATP5F1P24539 256 aaPredicted RBP15.14■□□□□ 0.01
CUX1-214ENST00000550008 CRHR1P34998 444 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 INCA1Q0VD86 236 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 SMOQ99835 787 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 EBF4Q9BQW3 602 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 GTF2IRD1Q9UHL9 959 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 VWA7Q9Y334 891 aa15.14■□□□□ 0.01
CUX1-214ENST00000550008 PLIN3O60664 434 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 CYP3A5P20815 502 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 GPR15P49685 360 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 PURAQ00577 322 aaKnown RBP15.13■□□□□ 0.01
CUX1-214ENST00000550008 DET1Q7L5Y6 550 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 GDPD5Q8WTR4 605 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 HMCESQ96FZ2 354 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 PPP1R10Q96QC0 940 aaKnown RBP15.13■□□□□ 0.01
CUX1-214ENST00000550008 HGH1Q9BTY7 390 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 HIPK3Q9H422 1215 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 ASB8Q9H765 288 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 CRTAC1Q9NQ79 661 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 STX18Q9P2W9 335 aaKnown RBP15.13■□□□□ 0.01
CUX1-214ENST00000550008 NEMP2A6NFY4 417 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 FFAR3O14843 346 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 GPR42O15529 346 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 PEX1O43933 1283 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 LZTS3O60299 673 aaPredicted RBP15.13■□□□□ 0.01
CUX1-214ENST00000550008 PGGT1BP53609 377 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 POTEHQ6S545 545 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 TDRPQ86YL5 185 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 SLC44A2Q8IWA5 706 aaPredicted RBP15.13■□□□□ 0.01
CUX1-214ENST00000550008 TP53INP2Q8IXH6 220 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 CATSPER1Q8NEC5 780 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 GBA3Q9H227 469 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 ADAM7Q9H2U9 754 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 WDR41Q9HAD4 459 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 IGKV6-21A0A0C4DH24 114 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 PSMD12O00232 456 aaPredicted RBP15.13■□□□□ 0.01
CUX1-214ENST00000550008 CNMDO75829 334 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 COX4I1P13073 169 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 GMPRP36959 345 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 SEMG2Q02383 582 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 ARHGAP15Q53QZ3 475 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 ARL13AQ5H913 290 aaPredicted RBP15.13■□□□□ 0.01
CUX1-214ENST00000550008 OTUD3Q5T2D3 398 aaPredicted RBP15.13■□□□□ 0.01
CUX1-214ENST00000550008 OR4K2Q8NGD2 314 aa15.13■□□□□ 0.01
CUX1-214ENST00000550008 DCAKDQ8WVC6 231 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms