RNA–Protein interactions for RNA: ENST00000549094.1

SMPDL3B-206, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 5 BASIC

Gene SMPDL3B, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-206ENST00000549094 SLC39A10Q9ULF5 831 aa13.6□□□□□ -0.23
SMPDL3B-206ENST00000549094 AP4S1Q9Y587 144 aa13.6□□□□□ -0.23
SMPDL3B-206ENST00000549094 COPG1Q9Y678 874 aaKnown RBP13.6□□□□□ -0.23
SMPDL3B-206ENST00000549094 CEPT1Q9Y6K0 416 aa13.6□□□□□ -0.23
SMPDL3B-206ENST00000549094 EVPLQ92817 2033 aa13.6□□□□□ -0.23
SMPDL3B-206ENST00000549094 FNDC1Q4ZHG4 1894 aaPredicted RBP13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 TK2O00142 265 aa13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 H6PDO95479 791 aa13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 CDK4P11802 303 aa13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 NUP107P57740 925 aa13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 PSME3P61289 254 aa13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 MS4A2Q01362 244 aa13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 PPIDQ08752 370 aaKnown RBP13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 CDH17Q12864 832 aa13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 USP10Q14694 798 aaKnown RBP13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 MGAT5BQ3V5L5 792 aa13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 KCTD11Q693B1 232 aa13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 CARM1Q86X55 608 aa13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 DEFB106AQ8N104 65 aa13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 TNIP2Q8NFZ5 429 aa13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 NTAN1Q96AB6 310 aa13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 RMND5BQ96G75 393 aaPredicted RBP13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 DNAJC1Q96KC8 554 aaKnown RBP13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 SNX27Q96L92 541 aa13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 KLHL32Q96NJ5 620 aa13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 UHRF1Q96T88 793 aaPredicted RBP13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 AGAP2Q99490 1192 aa13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 MTG1Q9BT17 334 aaPredicted RBP13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 KATNAL1Q9BW62 490 aa13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 TRIM15Q9C019 465 aa13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 CRISPLD2Q9H0B8 497 aa13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 TRPV6Q9H1D0 765 aa13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 SNX25Q9H3E2 840 aa13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 DNAAF2Q9NVR5 837 aaKnown RBP13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 ADA2Q9NZK5 511 aa13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 NCKIPSDQ9NZQ3 722 aa13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 LMCD1Q9NZU5 365 aa13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 IPO11Q9UI26 975 aaKnown RBP13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 PACSIN3Q9UKS6 424 aa13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 G3BP2Q9UN86 482 aaKnown RBP13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 PDCD11Q14690 1871 aaKnown RBP13.59□□□□□ -0.23
SMPDL3B-206ENST00000549094 A0A087X1B8 175 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 SRP72O76094 671 aaKnown RBP13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 BMP10O95393 424 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 F2P00734 622 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 ZNF26P17031 533 aaPredicted RBP13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 SLC7A1P30825 629 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 HCAR3P49019 387 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 NAGLUP54802 743 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 INHBCP55103 352 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 DNAJB13P59910 316 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 PURAQ00577 322 aaKnown RBP13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 RHDQ02161 417 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 TRIM25Q14258 630 aaKnown RBP13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 GRM3Q14832 879 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 KCNA10Q16322 511 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 DHRS4L2Q6PKH6 230 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 HACD2Q6Y1H2 254 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 LPCAT2Q7L5N7 544 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 BNIPLQ7Z465 357 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 AMIGO2Q86SJ2 522 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 ZC3HC1Q86WB0 502 aaKnown RBP13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 PACRGLQ8N7B6 248 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 C7orf31Q8N865 590 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 FAM149B1Q96BN6 582 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 HDAC11Q96DB2 347 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 CCDC126Q96EE4 140 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 TNIP3Q96KP6 325 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 PPP1R2P1Q96PQ5 205 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 TSEN34Q9BSV6 310 aaKnown RBP13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 CEP41Q9BYV8 373 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 C8orf4Q9NR00 106 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 DDX18Q9NVP1 670 aaKnown RBP13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 ZDHHC2Q9UIJ5 367 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 SLC8A2Q9UPR5 921 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 NR2E3Q9Y5X4 410 aa13.58□□□□□ -0.24
SMPDL3B-206ENST00000549094 TCAF2A6NFQ2 919 aa13.57□□□□□ -0.24
SMPDL3B-206ENST00000549094 MOXD2PA6NHM9 499 aa13.57□□□□□ -0.24
SMPDL3B-206ENST00000549094 C9IYK1 514 aa13.57□□□□□ -0.24
SMPDL3B-206ENST00000549094 H3BNH8 94 aa13.57□□□□□ -0.24
SMPDL3B-206ENST00000549094 ZNF701M0R085 212 aaPredicted RBP13.57□□□□□ -0.24
SMPDL3B-206ENST00000549094 XPOTO43592 962 aaKnown RBP13.57□□□□□ -0.24
SMPDL3B-206ENST00000549094 RNASEH2AO75792 299 aaKnown RBP13.57□□□□□ -0.24
SMPDL3B-206ENST00000549094 ASGR1P07306 291 aa13.57□□□□□ -0.24
SMPDL3B-206ENST00000549094 SLC5A2P31639 672 aa13.57□□□□□ -0.24
SMPDL3B-206ENST00000549094 PNPLA4P41247 253 aa13.57□□□□□ -0.24
SMPDL3B-206ENST00000549094 DPP6P42658 865 aa13.57□□□□□ -0.24
SMPDL3B-206ENST00000549094 RAB15P59190 212 aa13.57□□□□□ -0.24
SMPDL3B-206ENST00000549094 TPI1P60174 286 aa13.57□□□□□ -0.24
SMPDL3B-206ENST00000549094 ESRRGP62508 458 aa13.57□□□□□ -0.24
SMPDL3B-206ENST00000549094 IGBP1P78318 339 aa13.57□□□□□ -0.24
SMPDL3B-206ENST00000549094 COG7P83436 770 aa13.57□□□□□ -0.24
SMPDL3B-206ENST00000549094 SCAPQ12770 1279 aa13.57□□□□□ -0.24
SMPDL3B-206ENST00000549094 PDAP1Q13442 181 aaKnown RBP13.57□□□□□ -0.24
SMPDL3B-206ENST00000549094 IKBKEQ14164 716 aa13.57□□□□□ -0.24
SMPDL3B-206ENST00000549094 CYTH1Q15438 398 aa13.57□□□□□ -0.24
SMPDL3B-206ENST00000549094 DLG2Q15700 870 aa13.57□□□□□ -0.24
SMPDL3B-206ENST00000549094 SMAD1Q15797 465 aaKnown RBP13.57□□□□□ -0.24
SMPDL3B-206ENST00000549094 KCTD21Q4G0X4 260 aa13.57□□□□□ -0.24
SMPDL3B-206ENST00000549094 GLRA4Q5JXX5 417 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms