RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 PRRT3Q5FWE3 981 aa16.73■□□□□ 0.27
SSH1-208ENST00000548522 IGF2-ASQ6U949 168 aa16.73■□□□□ 0.27
SSH1-208ENST00000548522 ZNF783Q6ZMS7 281 aa16.73■□□□□ 0.27
SSH1-208ENST00000548522 RBM44Q6ZP01 1051 aaKnown RBP16.73■□□□□ 0.27
SSH1-208ENST00000548522 NYAP1Q6ZVC0 841 aa16.73■□□□□ 0.27
SSH1-208ENST00000548522 RYBPQ8N488 228 aaPredicted RBP16.73■□□□□ 0.27
SSH1-208ENST00000548522 EMC1Q8N766 993 aa16.73■□□□□ 0.27
SSH1-208ENST00000548522 NETO2Q8NC67 525 aa16.73■□□□□ 0.27
SSH1-208ENST00000548522 TMEM35BQ8NCS4 154 aa16.73■□□□□ 0.27
SSH1-208ENST00000548522 FAM174AQ8TBP5 190 aa16.73■□□□□ 0.27
SSH1-208ENST00000548522 SNRNP27Q8WVK2 155 aaKnown RBP16.73■□□□□ 0.27
SSH1-208ENST00000548522 C18orf8Q96DM3 657 aa16.73■□□□□ 0.27
SSH1-208ENST00000548522 LENG8Q96PV6 779 aaPredicted RBP16.73■□□□□ 0.27
SSH1-208ENST00000548522 BOCQ9BWV1 1114 aa16.73■□□□□ 0.27
SSH1-208ENST00000548522 MAGEB5Q9BZ81 275 aa16.73■□□□□ 0.27
SSH1-208ENST00000548522 DPH1Q9BZG8 443 aa16.73■□□□□ 0.27
SSH1-208ENST00000548522 TSPY26PQ9H489 355 aa16.73■□□□□ 0.27
SSH1-208ENST00000548522 EVA1BQ9NVM1 165 aa16.73■□□□□ 0.27
SSH1-208ENST00000548522 APOBEC3BQ9UH17 382 aaKnown RBP16.73■□□□□ 0.27
SSH1-208ENST00000548522 NEU3Q9UQ49 428 aa16.73■□□□□ 0.27
SSH1-208ENST00000548522 SYCE3A1L190 88 aa16.72■□□□□ 0.27
SSH1-208ENST00000548522 CDRT15L2A8MXV6 281 aa16.72■□□□□ 0.27
SSH1-208ENST00000548522 NEMP1O14524 444 aa16.72■□□□□ 0.27
SSH1-208ENST00000548522 F9P00740 461 aa16.72■□□□□ 0.27
SSH1-208ENST00000548522 UGT2B4P06133 528 aa16.72■□□□□ 0.27
SSH1-208ENST00000548522 CYP11B1P15538 503 aa16.72■□□□□ 0.27
SSH1-208ENST00000548522 ITIH2P19823 946 aa16.72■□□□□ 0.27
SSH1-208ENST00000548522 RBMS1P29558 406 aaKnown RBP16.72■□□□□ 0.27
SSH1-208ENST00000548522 MTIF2P46199 727 aaKnown RBP16.72■□□□□ 0.27
SSH1-208ENST00000548522 SNX16P57768 344 aa16.72■□□□□ 0.27
SSH1-208ENST00000548522 CLN3Q13286 438 aa16.72■□□□□ 0.27
SSH1-208ENST00000548522 SGCGQ13326 291 aa16.72■□□□□ 0.27
SSH1-208ENST00000548522 ATXN7L2Q5T6C5 722 aaPredicted RBP16.72■□□□□ 0.27
SSH1-208ENST00000548522 RBM43Q6ZSC3 357 aaKnown RBP16.72■□□□□ 0.27
SSH1-208ENST00000548522 VPS36Q86VN1 386 aa16.72■□□□□ 0.27
SSH1-208ENST00000548522 PHACTR4Q8IZ21 702 aa16.72■□□□□ 0.27
SSH1-208ENST00000548522 WBP1Q96G27 269 aa16.72■□□□□ 0.27
SSH1-208ENST00000548522 HAPLN3Q96S86 360 aa16.72■□□□□ 0.27
SSH1-208ENST00000548522 IL12RB2Q99665 862 aa16.72■□□□□ 0.27
SSH1-208ENST00000548522 CLPBQ9H078 707 aa16.72■□□□□ 0.27
SSH1-208ENST00000548522 PDCL3Q9H2J4 239 aa16.72■□□□□ 0.27
SSH1-208ENST00000548522 SYNDIG1Q9H7V2 258 aa16.72■□□□□ 0.27
SSH1-208ENST00000548522 MBNL1Q9NR56 388 aaKnown RBP16.72■□□□□ 0.27
SSH1-208ENST00000548522 SALL4Q9UJQ4 1053 aa16.72■□□□□ 0.27
SSH1-208ENST00000548522 TMEM59LQ9UK28 342 aa16.72■□□□□ 0.27
SSH1-208ENST00000548522 PAXBP1Q9Y5B6 917 aa16.72■□□□□ 0.27
SSH1-208ENST00000548522 PCDHGA8Q9Y5G5 932 aa16.72■□□□□ 0.27
SSH1-208ENST00000548522 FHOD1Q9Y613 1164 aa16.72■□□□□ 0.27
SSH1-208ENST00000548522 FAM72CH0Y354 149 aa16.71■□□□□ 0.27
SSH1-208ENST00000548522 K7ENP7 123 aa16.71■□□□□ 0.27
SSH1-208ENST00000548522 KRIT1O00522 736 aa16.71■□□□□ 0.27
SSH1-208ENST00000548522 TSPAN6O43657 245 aa16.71■□□□□ 0.27
SSH1-208ENST00000548522 SCNN1AP37088 669 aa16.71■□□□□ 0.27
SSH1-208ENST00000548522 ADKP55263 362 aaKnown RBP16.71■□□□□ 0.27
SSH1-208ENST00000548522 ATP11AP98196 1134 aa16.71■□□□□ 0.27
SSH1-208ENST00000548522 SLC20A2Q08357 652 aa16.71■□□□□ 0.27
SSH1-208ENST00000548522 RAPGEF1Q13905 1077 aa16.71■□□□□ 0.27
SSH1-208ENST00000548522 CAMK4Q16566 473 aa16.71■□□□□ 0.27
SSH1-208ENST00000548522 ZNF805Q5CZA5 627 aa16.71■□□□□ 0.27
SSH1-208ENST00000548522 FAM72AQ5TYM5 149 aa16.71■□□□□ 0.27
SSH1-208ENST00000548522 MANEALQ5VSG8 457 aa16.71■□□□□ 0.27
SSH1-208ENST00000548522 FAM72DQ6L9T8 149 aa16.71■□□□□ 0.27
SSH1-208ENST00000548522 INO80CQ6PI98 192 aaPredicted RBP16.71■□□□□ 0.27
SSH1-208ENST00000548522 B3GNT8Q7Z7M8 397 aa16.71■□□□□ 0.27
SSH1-208ENST00000548522 NOP9Q86U38 636 aaKnown RBP16.71■□□□□ 0.27
SSH1-208ENST00000548522 FAM72BQ86X60 149 aa16.71■□□□□ 0.27
SSH1-208ENST00000548522 DENND6BQ8NEG7 585 aa16.71■□□□□ 0.27
SSH1-208ENST00000548522 ARHGEF2Q92974 986 aaKnown RBP16.71■□□□□ 0.27
SSH1-208ENST00000548522 CENPTQ96BT3 561 aa16.71■□□□□ 0.27
SSH1-208ENST00000548522 CCDC3Q9BQI4 270 aa16.71■□□□□ 0.27
SSH1-208ENST00000548522 DNAI1Q9UI46 699 aa16.71■□□□□ 0.27
SSH1-208ENST00000548522 RABGEF1Q9UJ41 708 aa16.71■□□□□ 0.27
SSH1-208ENST00000548522 RP1P56715 2156 aa16.7■□□□□ 0.26
SSH1-208ENST00000548522 TPP1O14773 563 aa16.7■□□□□ 0.26
SSH1-208ENST00000548522 AREL1O15033 823 aa16.7■□□□□ 0.26
SSH1-208ENST00000548522 MMP20O60882 483 aa16.7■□□□□ 0.26
SSH1-208ENST00000548522 TNFSF15O95150 251 aa16.7■□□□□ 0.26
SSH1-208ENST00000548522 GJB6O95452 261 aa16.7■□□□□ 0.26
SSH1-208ENST00000548522 C6P13671 934 aa16.7■□□□□ 0.26
SSH1-208ENST00000548522 TSHRP16473 764 aa16.7■□□□□ 0.26
SSH1-208ENST00000548522 CDO1Q16878 200 aa16.7■□□□□ 0.26
SSH1-208ENST00000548522 C15orf59Q2T9L4 293 aaPredicted RBP16.7■□□□□ 0.26
SSH1-208ENST00000548522 HSP90AA4PQ58FG1 418 aa16.7■□□□□ 0.26
SSH1-208ENST00000548522 C6orf132Q5T0Z8 1188 aa16.7■□□□□ 0.26
SSH1-208ENST00000548522 PHLDB2Q86SQ0 1253 aa16.7■□□□□ 0.26
SSH1-208ENST00000548522 NLRP14Q86W24 1093 aa16.7■□□□□ 0.26
SSH1-208ENST00000548522 KYQ8NBH2 561 aa16.7■□□□□ 0.26
SSH1-208ENST00000548522 OR2AP1Q8NGE2 309 aa16.7■□□□□ 0.26
SSH1-208ENST00000548522 CPA5Q8WXQ8 436 aa16.7■□□□□ 0.26
SSH1-208ENST00000548522 ISG20Q96AZ6 181 aaKnown RBP16.7■□□□□ 0.26
SSH1-208ENST00000548522 KLHL32Q96NJ5 620 aa16.7■□□□□ 0.26
SSH1-208ENST00000548522 METTL5Q9NRN9 209 aaKnown RBP16.7■□□□□ 0.26
SSH1-208ENST00000548522 NCKIPSDQ9NZQ3 722 aa16.7■□□□□ 0.26
SSH1-208ENST00000548522 PPARGC1AQ9UBK2 798 aaKnown RBP16.7■□□□□ 0.26
SSH1-208ENST00000548522 SPASTQ9UBP0 616 aa16.7■□□□□ 0.26
SSH1-208ENST00000548522 KIF26BQ2KJY2 2108 aa16.7■□□□□ 0.26
SSH1-208ENST00000548522 DOCK4Q8N1I0 1966 aa16.69■□□□□ 0.26
SSH1-208ENST00000548522 B8ZZF3 427 aa16.69■□□□□ 0.26
SSH1-208ENST00000548522 LMO7DNF2Z398 122 aa16.69■□□□□ 0.26
SSH1-208ENST00000548522 YY2O15391 372 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms