RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 CSNK1DP48730 415 aa13.59□□□□□ -0.23
PTCH1-215ENST00000547672 AP1S1P61966 158 aa13.59□□□□□ -0.23
PTCH1-215ENST00000547672 DSC2Q02487 901 aa13.59□□□□□ -0.23
PTCH1-215ENST00000547672 SULT2A1Q06520 285 aa13.59□□□□□ -0.23
PTCH1-215ENST00000547672 PCSK7Q16549 785 aa13.59□□□□□ -0.23
PTCH1-215ENST00000547672 TEDDM1Q5T9Z0 273 aa13.59□□□□□ -0.23
PTCH1-215ENST00000547672 KIAA0930Q6ICG6 404 aaPredicted RBP13.59□□□□□ -0.23
PTCH1-215ENST00000547672 CXorf57Q6NSI4 855 aaKnown RBP13.59□□□□□ -0.23
PTCH1-215ENST00000547672 KYAT3Q6YP21 454 aaKnown RBP13.59□□□□□ -0.23
PTCH1-215ENST00000547672 RGS9BPQ6ZS82 235 aa13.59□□□□□ -0.23
PTCH1-215ENST00000547672 SHKBP1Q8TBC3 707 aa13.59□□□□□ -0.23
PTCH1-215ENST00000547672 BRSK1Q8TDC3 778 aa13.59□□□□□ -0.23
PTCH1-215ENST00000547672 SH3RF2Q8TEC5 729 aa13.59□□□□□ -0.23
PTCH1-215ENST00000547672 SREK1Q8WXA9 508 aaKnown RBP13.59□□□□□ -0.23
PTCH1-215ENST00000547672 ABHD8Q96I13 439 aa13.59□□□□□ -0.23
PTCH1-215ENST00000547672 TSNARE1Q96NA8 513 aa13.59□□□□□ -0.23
PTCH1-215ENST00000547672 PAIP2Q9BPZ3 127 aaKnown RBP13.59□□□□□ -0.23
PTCH1-215ENST00000547672 APOL2Q9BQE5 337 aa13.59□□□□□ -0.23
PTCH1-215ENST00000547672 PLAC1Q9HBJ0 212 aa13.59□□□□□ -0.23
PTCH1-215ENST00000547672 HACD3Q9P035 362 aa13.59□□□□□ -0.23
PTCH1-215ENST00000547672 DNMT3BQ9UBC3 853 aaKnown RBP13.59□□□□□ -0.23
PTCH1-215ENST00000547672 CHD5Q8TDI0 1954 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 CCDC195A0A1B0GUA6 201 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 SLC7A4O43246 635 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 SIN3BO75182 1162 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 SPAG7O75391 227 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 SLC34A2O95436 690 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 ASMTLO95671 621 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 CA3P07451 260 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 MMP2P08253 660 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 ITGA2BP08514 1039 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 ERVK-10P10266 1014 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 PYGBP11216 843 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 NEFHP12036 1026 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 RPA3P35244 121 aaPredicted RBP13.58□□□□□ -0.24
PTCH1-215ENST00000547672 SERPINB8P50452 374 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 SCNN1BP51168 640 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 RPL26P61254 145 aaKnown RBP13.58□□□□□ -0.24
PTCH1-215ENST00000547672 GRM3Q14832 879 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 POU6F1Q14863 301 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 TSTD2Q5T7W7 516 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 MROH9Q5TGP6 573 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 STRA8Q7Z7C7 330 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 GALNT7Q86SF2 657 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 NDUFAF2Q8N183 169 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 C4orf33Q8N1A6 199 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.58□□□□□ -0.24
PTCH1-215ENST00000547672 MGARPQ8TDB4 240 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 LRRC8CQ8TDW0 803 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 SPOCK2Q92563 424 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 PTPRN2Q92932 1015 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 MYEOVQ96EZ4 313 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 FCRL3Q96P31 734 aaPredicted RBP13.58□□□□□ -0.24
PTCH1-215ENST00000547672 RBBP8Q99708 897 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 C19orf43Q9BQ61 176 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 PIH1D1Q9NWS0 290 aaKnown RBP13.58□□□□□ -0.24
PTCH1-215ENST00000547672 MID2Q9UJV3 735 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 RPL26L1Q9UNX3 145 aaKnown RBP13.58□□□□□ -0.24
PTCH1-215ENST00000547672 ANKRD6Q9Y2G4 727 aa13.58□□□□□ -0.24
PTCH1-215ENST00000547672 MRPS23Q9Y3D9 190 aaKnown RBP13.58□□□□□ -0.24
PTCH1-215ENST00000547672 A0A1W2PQ67 120 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 C2orf81A6NN90 581 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 GLRA3O75311 464 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 PAPLNO95428 1278 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 COL6A2P12110 1019 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 NMBRP28336 390 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 TYK2P29597 1187 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 CCNFP41002 786 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 LIMK2P53671 638 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 MAXP61244 160 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 RHOAP61586 193 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 SEPT6Q14141 434 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 CYTH1Q15438 398 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 TEAD2Q15562 447 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 PDK4Q16654 411 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 HSP90AA5PQ58FG0 334 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 SIRPB2Q5JXA9 342 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 RNF43Q68DV7 783 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 NEPROQ6NW34 567 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 SDCCAG8Q86SQ7 713 aaPredicted RBP13.57□□□□□ -0.24
PTCH1-215ENST00000547672 CNTN4Q8IWV2 1026 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 BBS7Q8IWZ6 715 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 CACNA2D3Q8IZS8 1091 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 PGBD5Q8N414 524 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 SLC25A41Q8N5S1 370 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 CELF5Q8N6W0 485 aaKnown RBP13.57□□□□□ -0.24
PTCH1-215ENST00000547672 RAB3IL1Q8TBN0 382 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 TCP10LQ8TDR4 215 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 ZNF473Q8WTR7 871 aaKnown RBP13.57□□□□□ -0.24
PTCH1-215ENST00000547672 STYXQ8WUJ0 223 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 ISG20Q96AZ6 181 aaKnown RBP13.57□□□□□ -0.24
PTCH1-215ENST00000547672 MFSD3Q96ES6 412 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 ZNF317Q96PQ6 595 aaPredicted RBP13.57□□□□□ -0.24
PTCH1-215ENST00000547672 SFXN1Q9H9B4 322 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 SMYD2Q9NRG4 433 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 TLK1Q9UKI8 766 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 CORO1CQ9ULV4 474 aaPredicted RBP13.57□□□□□ -0.24
PTCH1-215ENST00000547672 SLC8A2Q9UPR5 921 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 OR51B4Q9Y5P0 310 aa13.57□□□□□ -0.24
PTCH1-215ENST00000547672 OBSL1O75147 1896 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms