RNA–Protein interactions for RNA: ENST00000547204.5

ARFGAP1-220, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 1,327 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-220ENST00000547204 MAGEA4P43358 317 aa17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 RGRP47804 291 aa17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 SLC6A11P48066 632 aa17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 SKOR1P84550 965 aa17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 ECT2LQ008S8 904 aa17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 NSUN2Q08J23 767 aaKnown RBP eCLIP17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 CASP8Q14790 479 aa17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 BBS9Q3SYG4 887 aa17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 MSS51Q4VC12 460 aa17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 TMEM215Q68D42 235 aa17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 TRMT10CQ7L0Y3 403 aaKnown RBP17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 ZBED8Q8IZ13 594 aa17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 ATP11CQ8NB49 1132 aa17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 TTC8Q8TAM2 541 aa17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 EXOC2Q96KP1 924 aa17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 PRRX2Q99811 253 aa17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 TBL1YQ9BQ87 522 aa17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 FICDQ9BVA6 458 aa17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 FSD1LQ9BXM9 530 aa17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 CDC42EP4Q9H3Q1 356 aaKnown RBP17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 SCUBE2Q9NQ36 999 aa17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 ZNF446Q9NWS9 450 aa17.1■□□□□ 0.33
ARFGAP1-220ENST00000547204 TTC24A2A3L6 582 aaPredicted RBP17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 AP3B1O00203 1094 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 ALOX15BO15296 676 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 INSIG1O15503 277 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 SMAD6O43541 496 aaKnown RBP17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 USP12O75317 370 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 AVILO75366 819 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 SERPINF2P08697 491 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 SRCP12931 536 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 AVPR2P30518 371 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 ADRA1AP35348 466 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 HSD17B3P37058 310 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 OPRD1P41143 372 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 EIF2DP41214 584 aaKnown RBP17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 STK19P49842 368 aaPredicted RBP17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 SCNN1BP51168 640 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 PTPN5P54829 565 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 WNT3AP56704 352 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 KDSRQ06136 332 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 OLIG2Q13516 323 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 RALGPS1Q5JS13 557 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 SH2D3CQ8N5H7 860 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 OR52K1Q8NGK4 314 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 CSGALNACT1Q8TDX6 532 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 UBLCP1Q8WVY7 318 aaPredicted RBP17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 NXPE3Q969Y0 559 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 RPL10LQ96L21 214 aaKnown RBP17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 MRGPRX2Q96LB1 330 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 FUT8Q9BYC5 575 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 CEP44Q9C0F1 390 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 PABPC3Q9H361 631 aaKnown RBP17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 SEMA4AQ9H3S1 761 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 MFSD1Q9H3U5 465 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 NOD2Q9HC29 1040 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 CASS4Q9NQ75 786 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 ERVW-1Q9UQF0 538 aa17.09■□□□□ 0.33
ARFGAP1-220ENST00000547204 KMT2EQ8IZD2 1858 aa17.08■□□□□ 0.33
ARFGAP1-220ENST00000547204 BANF1O75531 89 aa17.08■□□□□ 0.32
ARFGAP1-220ENST00000547204 GJB3O75712 270 aa17.08■□□□□ 0.32
ARFGAP1-220ENST00000547204 ATP5BP06576 529 aaKnown RBP17.08■□□□□ 0.32
ARFGAP1-220ENST00000547204 CSNK1DP48730 415 aa17.08■□□□□ 0.32
ARFGAP1-220ENST00000547204 AP1S1P61966 158 aa17.08■□□□□ 0.32
ARFGAP1-220ENST00000547204 CDH17Q12864 832 aa17.08■□□□□ 0.32
ARFGAP1-220ENST00000547204 MTM1Q13496 603 aa17.08■□□□□ 0.32
ARFGAP1-220ENST00000547204 IHHQ14623 411 aa17.08■□□□□ 0.32
ARFGAP1-220ENST00000547204 FASTKD3Q14CZ7 662 aaKnown RBP17.08■□□□□ 0.32
ARFGAP1-220ENST00000547204 EIF4HQ15056 248 aaKnown RBP17.08■□□□□ 0.32
ARFGAP1-220ENST00000547204 UAP1Q16222 522 aaPredicted RBP17.08■□□□□ 0.32
ARFGAP1-220ENST00000547204 PCSK7Q16549 785 aa17.08■□□□□ 0.32
ARFGAP1-220ENST00000547204 C22orf39Q6P5X5 142 aa17.08■□□□□ 0.32
ARFGAP1-220ENST00000547204 PHTF2Q8N3S3 785 aa17.08■□□□□ 0.32
ARFGAP1-220ENST00000547204 DNAAF3Q8N9W5 541 aa17.08■□□□□ 0.32
ARFGAP1-220ENST00000547204 ISG20Q96AZ6 181 aaKnown RBP17.08■□□□□ 0.32
ARFGAP1-220ENST00000547204 LRRC39Q96DD0 335 aa17.08■□□□□ 0.32
ARFGAP1-220ENST00000547204 TTC25Q96NG3 672 aa17.08■□□□□ 0.32
ARFGAP1-220ENST00000547204 APOL2Q9BQE5 337 aa17.08■□□□□ 0.32
ARFGAP1-220ENST00000547204 CIPCQ9C0C6 399 aa17.08■□□□□ 0.32
ARFGAP1-220ENST00000547204 NINJ2Q9NZG7 142 aa17.08■□□□□ 0.32
ARFGAP1-220ENST00000547204 FBXL21Q9UKT6 434 aa17.08■□□□□ 0.32
ARFGAP1-220ENST00000547204 ATP8B1O43520 1251 aa17.07■□□□□ 0.32
ARFGAP1-220ENST00000547204 TIMM44O43615 452 aa17.07■□□□□ 0.32
ARFGAP1-220ENST00000547204 NARSO43776 548 aaKnown RBP17.07■□□□□ 0.32
ARFGAP1-220ENST00000547204 IGSF6O95976 241 aa17.07■□□□□ 0.32
ARFGAP1-220ENST00000547204 AGTP01019 485 aa17.07■□□□□ 0.32
ARFGAP1-220ENST00000547204 SRPRAP08240 638 aaKnown RBP17.07■□□□□ 0.32
ARFGAP1-220ENST00000547204 DLDP09622 509 aaKnown RBP17.07■□□□□ 0.32
ARFGAP1-220ENST00000547204 MAPK8P45983 427 aa17.07■□□□□ 0.32
ARFGAP1-220ENST00000547204 VASPP50552 380 aaPredicted RBP17.07■□□□□ 0.32
ARFGAP1-220ENST00000547204 SESN2P58004 480 aaPredicted RBP17.07■□□□□ 0.32
ARFGAP1-220ENST00000547204 PREPLQ4J6C6 727 aaPredicted RBP17.07■□□□□ 0.32
ARFGAP1-220ENST00000547204 CCDC38Q502W7 563 aa17.07■□□□□ 0.32
ARFGAP1-220ENST00000547204 HP1BP3Q5SSJ5 553 aaPredicted RBP17.07■□□□□ 0.32
ARFGAP1-220ENST00000547204 ATXN7L2Q5T6C5 722 aaPredicted RBP17.07■□□□□ 0.32
ARFGAP1-220ENST00000547204 NCEH1Q6PIU2 408 aa17.07■□□□□ 0.32
ARFGAP1-220ENST00000547204 SRLQ86TD4 932 aa17.07■□□□□ 0.32
ARFGAP1-220ENST00000547204 ANKMY2Q8IV38 441 aa17.07■□□□□ 0.32
ARFGAP1-220ENST00000547204 PCDH20Q8N6Y1 951 aaKnown RBP17.07■□□□□ 0.32
ARFGAP1-220ENST00000547204 TERB1Q8NA31 727 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms