RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 SIRPGQ9P1W8 387 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 PLA2G4CQ9UP65 541 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 FAM50BQ9Y247 325 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.86□□□□□ -0.35
SCAF11-209ENST00000547018 ATP6AP2A0A1C7CYW4 349 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 NCF1BA6NI72 391 aaPredicted RBP12.86□□□□□ -0.35
SCAF11-209ENST00000547018 NCF1CA8MVU1 366 aaPredicted RBP12.86□□□□□ -0.35
SCAF11-209ENST00000547018 MUSKO15146 869 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 ATP6AP2O75787 350 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 ALDH1A2O94788 518 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 TOMM70O94826 608 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 PIGNO95427 931 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 NCF1P14598 390 aaPredicted RBP12.86□□□□□ -0.35
SCAF11-209ENST00000547018 STMN1P16949 149 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 ATF6P18850 670 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 PMLP29590 882 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 RENBPP51606 427 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 AIF1P55008 147 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 TWF1Q12792 350 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 RGS9BPQ6ZS82 235 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 LINC00523Q86TU6 105 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 CCNJLQ8IV13 435 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 FSTL5Q8N475 847 aaPredicted RBP12.86□□□□□ -0.35
SCAF11-209ENST00000547018 TEX9Q8N6V9 391 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 EIF2B3Q9NR50 452 aaKnown RBP12.86□□□□□ -0.35
SCAF11-209ENST00000547018 SCML2Q9UQR0 700 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 TLR6Q9Y2C9 796 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 ACOT9Q9Y305 439 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 AIM2O14862 343 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 FGF10O15520 208 aaPredicted RBP12.86□□□□□ -0.35
SCAF11-209ENST00000547018 CCDC22O60826 627 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 SERPINE1P05121 402 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 BMP1P13497 986 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 PTPN4P29074 926 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 GRIA4P48058 902 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 HARS2P49590 506 aaKnown RBP12.86□□□□□ -0.35
SCAF11-209ENST00000547018 CDH13P55290 713 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 NME5P56597 212 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 TRIM60Q495X7 471 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 ZC3HC1Q86WB0 502 aaKnown RBP12.86□□□□□ -0.35
SCAF11-209ENST00000547018 PHTF2Q8N3S3 785 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 CARNMT1Q8N4J0 409 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 RBM15BQ8NDT2 890 aaKnown RBP12.86□□□□□ -0.35
SCAF11-209ENST00000547018 WDR60Q8WVS4 1066 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 VAT1Q99536 393 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 ABCG8Q9H221 673 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 PRM3Q9NNZ6 103 aa12.86□□□□□ -0.35
SCAF11-209ENST00000547018 MARCH4Q9P2E8 410 aaPredicted RBP12.86□□□□□ -0.35
SCAF11-209ENST00000547018 RALGAPA2Q2PPJ7 1873 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 SNAP91O60641 907 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 FKTNO75072 461 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 CCDC166P0CW27 439 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 SLC8A1P32418 973 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 SERPINH1P50454 418 aaKnown RBP12.85□□□□□ -0.35
SCAF11-209ENST00000547018 SGSHP51688 502 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 ABCE1P61221 599 aaKnown RBP12.85□□□□□ -0.35
SCAF11-209ENST00000547018 KHDC1Q4VXA5 237 aaKnown RBP12.85□□□□□ -0.35
SCAF11-209ENST00000547018 SLC9B1Q4ZJI4 515 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 RALGPS1Q5JS13 557 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 DENND5AQ6IQ26 1287 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 KYAT3Q6YP21 454 aaKnown RBP12.85□□□□□ -0.35
SCAF11-209ENST00000547018 TPGS1Q6ZTW0 290 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 MAPK15Q8TD08 544 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 DNAJC1Q96KC8 554 aaKnown RBP12.85□□□□□ -0.35
SCAF11-209ENST00000547018 BTN2A3PQ96KV6 586 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 SLC38A8A6NNN8 435 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 KRT36O76013 467 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 GSTA2P09210 222 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 TCN1P20061 433 aaPredicted RBP12.85□□□□□ -0.35
SCAF11-209ENST00000547018 SLC6A4P31645 630 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 ATP5C1P36542 298 aaKnown RBP12.85□□□□□ -0.35
SCAF11-209ENST00000547018 ANO4Q32M45 955 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 SPDYAQ5MJ70 313 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 PDPK2PQ6A1A2 396 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 ASRGL1Q7L266 308 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 RPAINQ86UA6 219 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 MFSD6LQ8IWD5 586 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 TDRD5Q8NAT2 981 aaKnown RBP12.85□□□□□ -0.35
SCAF11-209ENST00000547018 TMEM169Q96HH4 297 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 OR52B2Q96RD2 323 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 TRIM62Q9BVG3 475 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 COG4Q9H9E3 785 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 GPAMQ9HCL2 828 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 UTP6Q9NYH9 597 aaKnown RBP12.85□□□□□ -0.35
SCAF11-209ENST00000547018 COMMD10Q9Y6G5 202 aa12.85□□□□□ -0.35
SCAF11-209ENST00000547018 TIMM44O43615 452 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 SEC24AO95486 1093 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 GSRP00390 522 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 TACR2P21452 398 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 CST5P28325 142 aaPredicted RBP12.84□□□□□ -0.35
SCAF11-209ENST00000547018 ELF1P32519 619 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 CSE1LP55060 971 aaKnown RBP12.84□□□□□ -0.35
SCAF11-209ENST00000547018 CUL3Q13618 768 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 ARL13AQ5H913 290 aaPredicted RBP12.84□□□□□ -0.35
SCAF11-209ENST00000547018 NADSYN1Q6IA69 706 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 NPAS4Q8IUM7 802 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 PGBD5Q8N414 524 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 DCBLD1Q8N8Z6 715 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 STMN2Q93045 179 aa12.84□□□□□ -0.35
SCAF11-209ENST00000547018 ESAMQ96AP7 390 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms