RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 CHD8Q9HCK8 2581 aa9.5□□□□□ -0.89
YBX3-218ENST00000546298 A0A1B0GTH6 734 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 FAM149AA5PLN7 773 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 TMEM191CA6NGB0 347 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 IGLON5A6NGN9 336 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 RNF103O00237 685 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 TAF4O00268 1085 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 EEF2KO00418 725 aaKnown RBP9.49□□□□□ -0.89
YBX3-218ENST00000546298 TOR1BO14657 336 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 RIOK3O14730 519 aaKnown RBP9.49□□□□□ -0.89
YBX3-218ENST00000546298 AREL1O15033 823 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 SIGLEC6O43699 453 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 PRPSAP2O60256 369 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 PIAS2O75928 621 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 FTLP02792 175 aaPredicted RBP9.49□□□□□ -0.89
YBX3-218ENST00000546298 CAPNS1P04632 268 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 MYBL1P10243 752 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 DGKAP23743 735 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 ACP1P24666 158 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 GKP32189 559 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 PRKCIP41743 596 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 DUSP3P51452 185 aaPredicted RBP9.49□□□□□ -0.89
YBX3-218ENST00000546298 ELP6Q0PNE2 266 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 PTK2BQ14289 1009 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 PROX2Q3B8N5 592 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 ATXN7L2Q5T6C5 722 aaPredicted RBP9.49□□□□□ -0.89
YBX3-218ENST00000546298 ERMARDQ5T6L9 678 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 LEKR1Q6ZMV7 388 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 VPS36Q86VN1 386 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 CACTIN-AS1Q8N1I8 211 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 SLC25A45Q8N413 288 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 CXorf40AQ8TE69 158 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 NXPE2Q96DL1 559 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 CPEB1Q9BZB8 566 aaKnown RBP9.49□□□□□ -0.89
YBX3-218ENST00000546298 DHX35Q9H5Z1 703 aaKnown RBP9.49□□□□□ -0.89
YBX3-218ENST00000546298 HAUS4Q9H6D7 363 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 NOL6Q9H6R4 1146 aaKnown RBP9.49□□□□□ -0.89
YBX3-218ENST00000546298 USP29Q9HBJ7 922 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 MRPL47Q9HD33 250 aaKnown RBP9.49□□□□□ -0.89
YBX3-218ENST00000546298 DNAJC28Q9NX36 388 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 TAS2R14Q9NYV8 317 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 NLGN3Q9NZ94 848 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 CNOT8Q9UFF9 292 aaKnown RBP9.49□□□□□ -0.89
YBX3-218ENST00000546298 AP4E1Q9UPM8 1137 aa9.49□□□□□ -0.89
YBX3-218ENST00000546298 CEP192Q8TEP8 1941 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 SPTY2D1-AS1A0A0U1RR47 76 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 POM121BA6NF01 834 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 TRIM38O00635 465 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 SCAMP1O15126 338 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 FFAR2O15552 330 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 TM7SF2O76062 418 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 CSF2P04141 144 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 NME1P15531 152 aaKnown RBP9.48□□□□□ -0.89
YBX3-218ENST00000546298 ABL2P42684 1182 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 HCAR3P49019 387 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 THOP1P52888 689 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 OGDHQ02218 1023 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 CYP4F3Q08477 520 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 CAMK2BQ13554 666 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 PDE1CQ14123 709 aaPredicted RBP9.48□□□□□ -0.89
YBX3-218ENST00000546298 FGL2Q14314 439 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 NR1I3Q14994 352 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 FIGNQ5HY92 759 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 CFAP58Q5T655 872 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 HES3Q5TGS1 186 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 RFX8Q6ZV50 586 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 ZNF571Q7Z3V5 609 aaPredicted RBP9.48□□□□□ -0.89
YBX3-218ENST00000546298 PARGQ86W56 976 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 DNAAF5Q86Y56 855 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 MDM1Q8TC05 714 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 BTN2A2Q8WVV5 523 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 ZNF653Q96CK0 615 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 IQCDQ96DY2 449 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 BMFQ96LC9 184 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 ZNF641Q96N77 438 aaPredicted RBP9.48□□□□□ -0.89
YBX3-218ENST00000546298 NAP1L5Q96NT1 182 aaPredicted RBP9.48□□□□□ -0.89
YBX3-218ENST00000546298 TUBGCP5Q96RT8 1024 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 KLF6Q99612 283 aaPredicted RBP9.48□□□□□ -0.89
YBX3-218ENST00000546298 KLC2Q9H0B6 622 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 GPR27Q9NS67 375 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 GPATCH2LQ9NWQ4 482 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 NCKIPSDQ9NZQ3 722 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 PCSK1NQ9UHG2 260 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 LHX6Q9UPM6 363 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 BZW2Q9Y6E2 419 aaKnown RBP9.48□□□□□ -0.89
YBX3-218ENST00000546298 CSNK1G3Q9Y6M4 447 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 ADAMTS9Q9P2N4 1935 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 FRYLO94915 3013 aa9.48□□□□□ -0.89
YBX3-218ENST00000546298 TMEM110-MUSTN1A8MSY1 372 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 DDX3XO00571 662 aaKnown RBP eCLIP9.47□□□□□ -0.89
YBX3-218ENST00000546298 RAD51BO15315 384 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 PRAMEF11O60813 436 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 MMP20O60882 483 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 PALMO75781 387 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 CKMT1AP12532 417 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 TIMP2P16035 220 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 MIPP30301 263 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 PCK1P35558 622 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 CSNK1DP48730 415 aa9.47□□□□□ -0.89
YBX3-218ENST00000546298 PAPOLAP51003 745 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms