RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 ANKRD20A1Q5TYW2 823 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 ANKRD20A3Q5VUR7 823 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 NSMCE1Q8WV22 266 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 OR8D1Q8WZ84 308 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 MAGOHBQ96A72 148 aaKnown RBP16.48■□□□□ 0.23
LIMS2-217ENST00000545738 OXNAD1Q96HP4 312 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-217ENST00000545738 HEPHQ9BQS7 1158 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 FRMD8P1Q9BZ68 369 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-217ENST00000545738 POLR1EQ9GZS1 481 aaKnown RBP16.48■□□□□ 0.23
LIMS2-217ENST00000545738 ZNF148Q9UQR1 794 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 PCDHGC4Q9Y5F7 938 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 MRFAP1Q9Y605 127 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 PHF2O75151 1096 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 METTL18O95568 372 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 COILP38432 576 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-217ENST00000545738 CSNK1DP48730 415 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 ITKQ08881 620 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 PID1Q7Z2X4 250 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 TAB3Q8N5C8 712 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-217ENST00000545738 MAIP1Q8WWC4 291 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 RLN3Q8WXF3 142 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 TADA1Q96BN2 335 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 IMP4Q96G21 291 aaKnown RBP16.48■□□□□ 0.23
LIMS2-217ENST00000545738 SPATA13Q96N96 652 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 SMIM14Q96QK8 99 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 RBM15Q96T37 977 aaKnown RBP eCLIP16.48■□□□□ 0.23
LIMS2-217ENST00000545738 GLOD4Q9HC38 313 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 POLMQ9NP87 494 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-217ENST00000545738 UBP1Q9NZI7 540 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 KLHL8Q9P2G9 620 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-217ENST00000545738 CDC23Q9UJX2 597 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 NEU2Q9Y3R4 380 aa16.48■□□□□ 0.23
LIMS2-217ENST00000545738 DOCK9Q9BZ29 2069 aa16.47■□□□□ 0.23
LIMS2-217ENST00000545738 C5orf60A6NFR6 353 aa16.47■□□□□ 0.23
LIMS2-217ENST00000545738 KIF2AO00139 706 aaPredicted RBP16.47■□□□□ 0.23
LIMS2-217ENST00000545738 ALOX15BO15296 676 aa16.47■□□□□ 0.23
LIMS2-217ENST00000545738 LAMTOR5O43504 91 aa16.47■□□□□ 0.23
LIMS2-217ENST00000545738 APBB3O95704 486 aa16.47■□□□□ 0.23
LIMS2-217ENST00000545738 POP4O95707 220 aaKnown RBP16.47■□□□□ 0.23
LIMS2-217ENST00000545738 PSMB4P28070 264 aa16.47■□□□□ 0.23
LIMS2-217ENST00000545738 HSPA9P38646 679 aaKnown RBP16.47■□□□□ 0.23
LIMS2-217ENST00000545738 CD86P42081 329 aa16.47■□□□□ 0.23
LIMS2-217ENST00000545738 RECQLP46063 649 aaPredicted RBP16.47■□□□□ 0.23
LIMS2-217ENST00000545738 SKOR1P84550 965 aa16.47■□□□□ 0.23
LIMS2-217ENST00000545738 OLIG2Q13516 323 aa16.47■□□□□ 0.23
LIMS2-217ENST00000545738 PTPRRQ15256 657 aa16.47■□□□□ 0.23
LIMS2-217ENST00000545738 E2F5Q15329 346 aa16.47■□□□□ 0.23
LIMS2-217ENST00000545738 LRRC73Q5JTD7 316 aa16.47■□□□□ 0.23
LIMS2-217ENST00000545738 FAXCQ5TGI0 409 aa16.47■□□□□ 0.23
LIMS2-217ENST00000545738 CCDC137Q6PK04 289 aaKnown RBP16.47■□□□□ 0.23
LIMS2-217ENST00000545738 KIAA1324Q6UXG2 1013 aaKnown RBP16.47■□□□□ 0.23
LIMS2-217ENST00000545738 FAM160A2Q8N612 972 aaPredicted RBP16.47■□□□□ 0.23
LIMS2-217ENST00000545738 SIPA1Q96FS4 1042 aa16.47■□□□□ 0.23
LIMS2-217ENST00000545738 NAP1L3Q99457 506 aaPredicted RBP16.47■□□□□ 0.23
LIMS2-217ENST00000545738 MLPHQ9BV36 600 aaPredicted RBP16.47■□□□□ 0.23
LIMS2-217ENST00000545738 C1QTNF1Q9BXJ1 281 aa16.47■□□□□ 0.23
LIMS2-217ENST00000545738 CPEB1Q9BZB8 566 aaKnown RBP16.47■□□□□ 0.23
LIMS2-217ENST00000545738 SCUBE2Q9NQ36 999 aa16.47■□□□□ 0.23
LIMS2-217ENST00000545738 AMACRQ9UHK6 382 aa16.47■□□□□ 0.23
LIMS2-217ENST00000545738 DRG1Q9Y295 367 aaKnown RBP16.47■□□□□ 0.23
LIMS2-217ENST00000545738 ABCA7Q8IZY2 2146 aa16.46■□□□□ 0.23
LIMS2-217ENST00000545738 SPINT1O43278 529 aa16.46■□□□□ 0.23
LIMS2-217ENST00000545738 MTSS1O43312 755 aa16.46■□□□□ 0.23
LIMS2-217ENST00000545738 GCATO75600 419 aa16.46■□□□□ 0.23
LIMS2-217ENST00000545738 PRLP01236 227 aa16.46■□□□□ 0.23
LIMS2-217ENST00000545738 IFNB1P01574 187 aa16.46■□□□□ 0.23
LIMS2-217ENST00000545738 PDHA1P08559 390 aa16.46■□□□□ 0.23
LIMS2-217ENST00000545738 ITIH2P19823 946 aa16.46■□□□□ 0.23
LIMS2-217ENST00000545738 SLC8A1P32418 973 aa16.46■□□□□ 0.23
LIMS2-217ENST00000545738 MRPS25P82663 173 aaKnown RBP16.46■□□□□ 0.23
LIMS2-217ENST00000545738 C2orf54Q08AI8 447 aa16.46■□□□□ 0.23
LIMS2-217ENST00000545738 ZNF776Q68DI1 518 aaPredicted RBP16.46■□□□□ 0.23
LIMS2-217ENST00000545738 PARS2Q7L3T8 475 aaKnown RBP16.46■□□□□ 0.23
LIMS2-217ENST00000545738 TMIEQ8NEW7 156 aa16.46■□□□□ 0.23
LIMS2-217ENST00000545738 SPATA4Q8NEY3 305 aa16.46■□□□□ 0.23
LIMS2-217ENST00000545738 KIF18AQ8NI77 898 aa16.46■□□□□ 0.23
LIMS2-217ENST00000545738 KLHL32Q96NJ5 620 aa16.46■□□□□ 0.23
LIMS2-217ENST00000545738 SLC25A51Q9H1U9 297 aa16.46■□□□□ 0.23
LIMS2-217ENST00000545738 GBA3Q9H227 469 aa16.46■□□□□ 0.23
LIMS2-217ENST00000545738 PLXND1Q9Y4D7 1925 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 A0A1W2PP55 124 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 KPNA3O00505 521 aaPredicted RBP16.45■□□□□ 0.22
LIMS2-217ENST00000545738 TUBB4AP04350 444 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 PRKCGP05129 697 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 FNTBP49356 437 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 TPMTP51580 245 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 AP1S1P61966 158 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 CSTF1Q05048 431 aaKnown RBP16.45■□□□□ 0.22
LIMS2-217ENST00000545738 CNTN1Q12860 1018 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 ANGPT1Q15389 498 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 TRIP13Q15645 432 aaPredicted RBP16.45■□□□□ 0.22
LIMS2-217ENST00000545738 SYCP2LQ5T4T6 812 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 GDPD4Q6W3E5 623 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 KLHL7Q8IXQ5 586 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 BBS5Q8N3I7 341 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 CAMKK1Q8N5S9 505 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 ECHDC3Q96DC8 303 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 CCDC114Q96M63 670 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 VAT1Q99536 393 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 PABPC3Q9H361 631 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms