RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 GDPD4Q6W3E5 623 aa17.17■□□□□ 0.34
HOXD8-204ENST00000544999 SPATS2Q86XZ4 545 aaKnown RBP17.17■□□□□ 0.34
HOXD8-204ENST00000544999 ARHGAP12Q8IWW6 846 aa17.17■□□□□ 0.34
HOXD8-204ENST00000544999 KLK6Q92876 244 aa17.17■□□□□ 0.34
HOXD8-204ENST00000544999 ARHGEF26Q96DR7 871 aa17.17■□□□□ 0.34
HOXD8-204ENST00000544999 KLHDC7BQ96G42 594 aa17.17■□□□□ 0.34
HOXD8-204ENST00000544999 KLHL32Q96NJ5 620 aa17.17■□□□□ 0.34
HOXD8-204ENST00000544999 CWC15Q9P013 229 aaKnown RBP17.17■□□□□ 0.34
HOXD8-204ENST00000544999 LHX3Q9UBR4 397 aa17.17■□□□□ 0.34
HOXD8-204ENST00000544999 APOBEC2Q9Y235 224 aaKnown RBP17.17■□□□□ 0.34
HOXD8-204ENST00000544999 H3BRJ5 948 aa17.16■□□□□ 0.34
HOXD8-204ENST00000544999 J3KR12 359 aa17.16■□□□□ 0.34
HOXD8-204ENST00000544999 TSPAN6O43657 245 aa17.16■□□□□ 0.34
HOXD8-204ENST00000544999 TOP3BO95985 862 aaKnown RBP17.16■□□□□ 0.34
HOXD8-204ENST00000544999 PRLRP16471 622 aa17.16■□□□□ 0.34
HOXD8-204ENST00000544999 EIF4A3P38919 411 aaKnown RBP17.16■□□□□ 0.34
HOXD8-204ENST00000544999 ARL4AP40617 200 aa17.16■□□□□ 0.34
HOXD8-204ENST00000544999 ARRB1P49407 418 aaPredicted RBP17.16■□□□□ 0.34
HOXD8-204ENST00000544999 SMTNL2Q2TAL5 461 aa17.16■□□□□ 0.34
HOXD8-204ENST00000544999 PRAMEF14Q5SWL7 426 aa17.16■□□□□ 0.34
HOXD8-204ENST00000544999 VSTM4Q8IW00 320 aa17.16■□□□□ 0.34
HOXD8-204ENST00000544999 LZTR1Q8N653 840 aa17.16■□□□□ 0.34
HOXD8-204ENST00000544999 NETO2Q8NC67 525 aa17.16■□□□□ 0.34
HOXD8-204ENST00000544999 OR8K1Q8NGG5 319 aa17.16■□□□□ 0.34
HOXD8-204ENST00000544999 FAM174AQ8TBP5 190 aa17.16■□□□□ 0.34
HOXD8-204ENST00000544999 TEKT4Q8WW24 435 aa17.16■□□□□ 0.34
HOXD8-204ENST00000544999 BTBD6Q96KE9 485 aa17.16■□□□□ 0.34
HOXD8-204ENST00000544999 DNAJC7Q99615 494 aa17.16■□□□□ 0.34
HOXD8-204ENST00000544999 MYOCQ99972 504 aa17.16■□□□□ 0.34
HOXD8-204ENST00000544999 SCNM1Q9BWG6 230 aa17.16■□□□□ 0.34
HOXD8-204ENST00000544999 CPEB1Q9BZB8 566 aaKnown RBP17.16■□□□□ 0.34
HOXD8-204ENST00000544999 CA5BQ9Y2D0 317 aa17.16■□□□□ 0.34
HOXD8-204ENST00000544999 SSU72P8A0A1W2PR75 194 aa17.15■□□□□ 0.34
HOXD8-204ENST00000544999 MYO1FO00160 1098 aa17.15■□□□□ 0.34
HOXD8-204ENST00000544999 HYAL3O43820 417 aaPredicted RBP17.15■□□□□ 0.34
HOXD8-204ENST00000544999 ITGAVP06756 1048 aa17.15■□□□□ 0.34
HOXD8-204ENST00000544999 TPM1P09493 284 aa17.15■□□□□ 0.34
HOXD8-204ENST00000544999 RARAP10276 462 aa17.15■□□□□ 0.34
HOXD8-204ENST00000544999 TCF4P15884 667 aa17.15■□□□□ 0.34
HOXD8-204ENST00000544999 EPHA8P29322 1005 aaPredicted RBP17.15■□□□□ 0.34
HOXD8-204ENST00000544999 SLC25A11Q02978 314 aaKnown RBP17.15■□□□□ 0.34
HOXD8-204ENST00000544999 GRM3Q14832 879 aa17.15■□□□□ 0.34
HOXD8-204ENST00000544999 SLC18A3Q16572 532 aa17.15■□□□□ 0.34
HOXD8-204ENST00000544999 POLNQ7Z5Q5 900 aa17.15■□□□□ 0.34
HOXD8-204ENST00000544999 RAB44Q7Z6P3 723 aaPredicted RBP17.15■□□□□ 0.34
HOXD8-204ENST00000544999 NPWQ8N729 165 aa17.15■□□□□ 0.34
HOXD8-204ENST00000544999 RNF214Q8ND24 703 aa17.15■□□□□ 0.34
HOXD8-204ENST00000544999 ZNF564Q8TBZ8 553 aaPredicted RBP17.15■□□□□ 0.34
HOXD8-204ENST00000544999 SAP25Q8TEE9 199 aa17.15■□□□□ 0.34
HOXD8-204ENST00000544999 ADAMTS14Q8WXS8 1223 aa17.15■□□□□ 0.34
HOXD8-204ENST00000544999 HSPH1Q92598 858 aa17.15■□□□□ 0.34
HOXD8-204ENST00000544999 SLC17A9Q9BYT1 436 aa17.15■□□□□ 0.34
HOXD8-204ENST00000544999 SP110Q9HB58 689 aa17.15■□□□□ 0.34
HOXD8-204ENST00000544999 FZD3Q9NPG1 666 aa17.15■□□□□ 0.34
HOXD8-204ENST00000544999 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.15■□□□□ 0.34
HOXD8-204ENST00000544999 ZNHIT6Q9NWK9 470 aaKnown RBP17.15■□□□□ 0.34
HOXD8-204ENST00000544999 DKK3Q9UBP4 350 aa17.15■□□□□ 0.34
HOXD8-204ENST00000544999 NEUROG3Q9Y4Z2 214 aa17.15■□□□□ 0.34
HOXD8-204ENST00000544999 HS3ST3A1Q9Y663 406 aa17.15■□□□□ 0.34
HOXD8-204ENST00000544999 COL5A1P20908 1838 aaPredicted RBP17.14■□□□□ 0.34
HOXD8-204ENST00000544999 DFFAO00273 331 aa17.14■□□□□ 0.33
HOXD8-204ENST00000544999 NEMP1O14524 444 aa17.14■□□□□ 0.33
HOXD8-204ENST00000544999 INSIG1O15503 277 aa17.14■□□□□ 0.33
HOXD8-204ENST00000544999 TNFSF14O43557 240 aa17.14■□□□□ 0.33
HOXD8-204ENST00000544999 H2AFZP0C0S5 128 aa17.14■□□□□ 0.33
HOXD8-204ENST00000544999 THEGLP0DJG4 465 aa17.14■□□□□ 0.33
HOXD8-204ENST00000544999 SPINK2P20155 84 aa17.14■□□□□ 0.33
HOXD8-204ENST00000544999 IL10RBQ08334 325 aa17.14■□□□□ 0.33
HOXD8-204ENST00000544999 FGL2Q14314 439 aa17.14■□□□□ 0.33
HOXD8-204ENST00000544999 RFTN1Q14699 578 aaPredicted RBP17.14■□□□□ 0.33
HOXD8-204ENST00000544999 ASTE1Q2TB18 679 aaPredicted RBP17.14■□□□□ 0.33
HOXD8-204ENST00000544999 GCNT7Q6ZNI0 430 aa17.14■□□□□ 0.33
HOXD8-204ENST00000544999 H2AFVQ71UI9 128 aa17.14■□□□□ 0.33
HOXD8-204ENST00000544999 ABI3BPQ7Z7G0 1075 aa17.14■□□□□ 0.33
HOXD8-204ENST00000544999 GATAD2AQ86YP4 633 aa17.14■□□□□ 0.33
HOXD8-204ENST00000544999 HCAR2Q8TDS4 363 aa17.14■□□□□ 0.33
HOXD8-204ENST00000544999 ASB12Q8WXK4 309 aa17.14■□□□□ 0.33
HOXD8-204ENST00000544999 EXOC2Q96KP1 924 aa17.14■□□□□ 0.33
HOXD8-204ENST00000544999 LENG8Q96PV6 779 aaPredicted RBP17.14■□□□□ 0.33
HOXD8-204ENST00000544999 DEF6Q9H4E7 631 aa17.14■□□□□ 0.33
HOXD8-204ENST00000544999 UVRAGQ9P2Y5 699 aa17.14■□□□□ 0.33
HOXD8-204ENST00000544999 A6NNZ2 444 aa17.13■□□□□ 0.33
HOXD8-204ENST00000544999 AREL1O15033 823 aa17.13■□□□□ 0.33
HOXD8-204ENST00000544999 SPINT1O43278 529 aa17.13■□□□□ 0.33
HOXD8-204ENST00000544999 PALMO75781 387 aa17.13■□□□□ 0.33
HOXD8-204ENST00000544999 PAK4O96013 591 aaPredicted RBP17.13■□□□□ 0.33
HOXD8-204ENST00000544999 CSNK1DP48730 415 aa17.13■□□□□ 0.33
HOXD8-204ENST00000544999 SUOXP51687 545 aa17.13■□□□□ 0.33
HOXD8-204ENST00000544999 HADHQ16836 314 aaKnown RBP17.13■□□□□ 0.33
HOXD8-204ENST00000544999 TSR1Q2NL82 804 aaKnown RBP17.13■□□□□ 0.33
HOXD8-204ENST00000544999 TXNRD3NBQ6F5E7 133 aa17.13■□□□□ 0.33
HOXD8-204ENST00000544999 TMCO3Q6UWJ1 677 aa17.13■□□□□ 0.33
HOXD8-204ENST00000544999 KYAT3Q6YP21 454 aaKnown RBP17.13■□□□□ 0.33
HOXD8-204ENST00000544999 TTC7BQ86TV6 843 aa17.13■□□□□ 0.33
HOXD8-204ENST00000544999 SLCO6A1Q86UG4 719 aa17.13■□□□□ 0.33
HOXD8-204ENST00000544999 CHCHD4Q8N4Q1 142 aa17.13■□□□□ 0.33
HOXD8-204ENST00000544999 CTNNBL1Q8WYA6 563 aaPredicted RBP17.13■□□□□ 0.33
HOXD8-204ENST00000544999 CSPG4P5Q96PW8 444 aa17.13■□□□□ 0.33
HOXD8-204ENST00000544999 TUBGCP5Q96RT8 1024 aa17.13■□□□□ 0.33
HOXD8-204ENST00000544999 CINPQ9BW66 212 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms