RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 LPCAT1Q8NF37 534 aa5.85□□□□□ -1.47
VPS50-220ENST00000544910 PCED1BQ96HM7 432 aa5.85□□□□□ -1.47
VPS50-220ENST00000544910 NDNQ99608 321 aa5.85□□□□□ -1.47
VPS50-220ENST00000544910 KCTD14Q9BQ13 255 aaPredicted RBP5.85□□□□□ -1.47
VPS50-220ENST00000544910 ADGRE3Q9BY15 652 aa5.85□□□□□ -1.47
VPS50-220ENST00000544910 GLOD4Q9HC38 313 aa5.85□□□□□ -1.47
VPS50-220ENST00000544910 XPR1Q9UBH6 696 aa5.85□□□□□ -1.47
VPS50-220ENST00000544910 SAC3D1A6NKF1 404 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 CHN2P52757 468 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 PPIDQ08752 370 aaKnown RBP5.84□□□□□ -1.47
VPS50-220ENST00000544910 USP4Q13107 963 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 PSMD5Q16401 504 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 TIFABQ6ZNK6 161 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 CLEC20AQ6ZU45 233 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 GLT6D1Q7Z4J2 308 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 DHFR2Q86XF0 187 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 CARNMT1Q8N4J0 409 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 MPP4Q96JB8 637 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 CLPTM1LQ96KA5 538 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 SLC25A23Q9BV35 468 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 APOL5Q9BWW9 433 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 NDEL1Q9GZM8 345 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 EPS8L2Q9H6S3 715 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 ALG9Q9H6U8 611 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 COPS7BQ9H9Q2 264 aaPredicted RBP5.84□□□□□ -1.47
VPS50-220ENST00000544910 TMCO1Q9UM00 188 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 SF3B1O75533 1304 aaKnown RBP eCLIP5.84□□□□□ -1.47
VPS50-220ENST00000544910 HNRNPCL2B2RXH8 293 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 PEX11AO75192 247 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 SERPINF2P08697 491 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 CCNFP41002 786 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 RECQLP46063 649 aaPredicted RBP5.84□□□□□ -1.47
VPS50-220ENST00000544910 PKNOX1P55347 436 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 RUNX1T1Q06455 604 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 CTBP1Q13363 440 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 CAPRIN1Q14444 709 aaKnown RBP5.84□□□□□ -1.47
VPS50-220ENST00000544910 KHDC1Q4VXA5 237 aaKnown RBP5.84□□□□□ -1.47
VPS50-220ENST00000544910 POTEHQ6S545 545 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 CCDC103Q8IW40 242 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 LGI2Q8N0V4 545 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 FBXO39Q8N4B4 442 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 SPATA6LQ8N4H0 392 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 GSTCDQ8NEC7 633 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 SNX19Q92543 992 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 NTAN1Q96AB6 310 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 GLT1D1Q96MS3 346 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 GORASP1Q9BQQ3 440 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 CCDC28BQ9BUN5 200 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 GDAP2Q9NXN4 497 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 C6orf203Q9P0P8 240 aaPredicted RBP5.84□□□□□ -1.47
VPS50-220ENST00000544910 SLC17A6Q9P2U8 582 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 EIF3LQ9Y262 564 aaKnown RBP5.84□□□□□ -1.47
VPS50-220ENST00000544910 MFHAS1Q9Y4C4 1052 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 PCDHB12Q9Y5F1 795 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 MYH10P35580 1976 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 ANKRD31Q8N7Z5 1873 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 A0A1W2PQH9 124 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 TRIM38O00635 465 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 CABYRO75952 493 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 MYO1DO94832 1006 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 CYBBP04839 570 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 CCDC166P0CW27 439 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 FCGR1AP12314 374 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 NMBRP28336 390 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 CD52P31358 61 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 LBRQ14739 615 aaKnown RBP5.84□□□□□ -1.47
VPS50-220ENST00000544910 FAM171A1Q5VUB5 890 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 FSTL4Q6MZW2 842 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 EMID1Q96A84 441 aaPredicted RBP5.84□□□□□ -1.47
VPS50-220ENST00000544910 SKA1Q96BD8 255 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 FAM136AQ96C01 138 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 PGLYRP2Q96PD5 576 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 SLC9A7Q96T83 725 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 CHRAC1Q9NRG0 131 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 TMPRSS4Q9NRS4 437 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 SCN3BQ9NY72 215 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 UBAP1Q9NZ09 502 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 SFMBT1Q9UHJ3 866 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 NUDT5Q9UKK9 219 aa5.84□□□□□ -1.47
VPS50-220ENST00000544910 ARL5CA6NH57 179 aa5.84□□□□□ -1.48
VPS50-220ENST00000544910 E9PAM4 449 aa5.84□□□□□ -1.48
VPS50-220ENST00000544910 TNFAIP8O95379 198 aa5.84□□□□□ -1.48
VPS50-220ENST00000544910 ATP6V1B1P15313 513 aa5.84□□□□□ -1.48
VPS50-220ENST00000544910 HCAR3P49019 387 aa5.84□□□□□ -1.48
VPS50-220ENST00000544910 RABGGTBP53611 331 aa5.84□□□□□ -1.48
VPS50-220ENST00000544910 NAGLUP54802 743 aa5.84□□□□□ -1.48
VPS50-220ENST00000544910 MRPS22P82650 360 aaKnown RBP5.84□□□□□ -1.48
VPS50-220ENST00000544910 FRG1Q14331 258 aaKnown RBP5.84□□□□□ -1.48
VPS50-220ENST00000544910 RAP1GAP2Q684P5 730 aa5.84□□□□□ -1.48
VPS50-220ENST00000544910 TMC5Q6UXY8 1006 aa5.84□□□□□ -1.48
VPS50-220ENST00000544910 LUZP2Q86TE4 346 aa5.84□□□□□ -1.48
VPS50-220ENST00000544910 TAC4Q86UU9 113 aa5.84□□□□□ -1.48
VPS50-220ENST00000544910 MYO1HQ8N1T3 1032 aa5.84□□□□□ -1.48
VPS50-220ENST00000544910 EFCAB3Q8N7B9 438 aa5.84□□□□□ -1.48
VPS50-220ENST00000544910 DENND1AQ8TEH3 1009 aa5.84□□□□□ -1.48
VPS50-220ENST00000544910 LENG1Q96BZ8 264 aaPredicted RBP5.84□□□□□ -1.48
VPS50-220ENST00000544910 NMD3Q96D46 503 aaKnown RBP5.84□□□□□ -1.48
VPS50-220ENST00000544910 DCUN1D1Q96GG9 259 aa5.84□□□□□ -1.48
VPS50-220ENST00000544910 OMDQ99983 421 aa5.84□□□□□ -1.48
VPS50-220ENST00000544910 MRPS26Q9BYN8 205 aaKnown RBP5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms