RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 ADH1AP07327 375 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 SOX6P35712 828 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 DRG2P55039 364 aaKnown RBP12.91□□□□□ -0.34
CHD4-211ENST00000544484 UBAP2LQ14157 1087 aaKnown RBP12.91□□□□□ -0.34
CHD4-211ENST00000544484 MON1AQ86VX9 555 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 DDHD1Q8NEL9 900 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 SNX15Q9NRS6 342 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 RHBDL2Q9NX52 303 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 PADI3Q9ULW8 664 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 H3BMM5 538 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 SLC9A3R1O14745 358 aaPredicted RBP12.91□□□□□ -0.34
CHD4-211ENST00000544484 CXCL14O95715 111 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 EPHA3P29320 983 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 HPCAL1P37235 193 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 FAM151BQ6UXP7 276 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 FGD2Q7Z6J4 655 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 C1orf127Q8N9H9 656 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 AHCYL2Q96HN2 611 aaKnown RBP12.91□□□□□ -0.34
CHD4-211ENST00000544484 CRATP43155 626 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 CDH13P55290 713 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 ZCCHC8Q6NZY4 707 aaKnown RBP12.91□□□□□ -0.34
CHD4-211ENST00000544484 XYLT1Q86Y38 959 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 GATAD2AQ86YP4 633 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 UGT2B28Q9BY64 529 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 CHKBQ9Y259 395 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 UBXN8O00124 270 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 EPN2O95208 641 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 HGSNATQ68CP4 663 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 TSHZ1Q6ZSZ6 1077 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 HJURPQ8NCD3 748 aaPredicted RBP12.91□□□□□ -0.34
CHD4-211ENST00000544484 GPR156Q8NFN8 814 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 DCUN1D5Q9BTE7 237 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 HIPK3Q9H422 1215 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 CCR4P51679 360 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 GBE1Q04446 702 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 ADRM1Q16186 407 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 AP5B1Q2VPB7 878 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 ZNF662Q6ZS27 426 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 DPP10Q8N608 796 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 USP7Q93009 1102 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 RMND5BQ96G75 393 aaPredicted RBP12.9□□□□□ -0.34
CHD4-211ENST00000544484 TTPALQ9BTX7 342 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 ZFYVE1Q9HBF4 777 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 CILPO75339 1184 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 PABPC1P11940 636 aaKnown RBP12.9□□□□□ -0.34
CHD4-211ENST00000544484 LPOP22079 712 aaPredicted RBP12.9□□□□□ -0.34
CHD4-211ENST00000544484 ADRA1BP35368 520 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 CASP12Q6UXS9 341 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 C10orf107Q8IVU9 208 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 C1orf50Q9BV19 199 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 PDZD7Q9H5P4 517 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 POLD2P49005 469 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 PREPLQ4J6C6 727 aaPredicted RBP12.9□□□□□ -0.34
CHD4-211ENST00000544484 LCLAT1Q6UWP7 414 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 HOMEZQ8IX15 550 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 STK32AQ8WU08 396 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 CSPG4P5Q96PW8 444 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 C1QTNF7Q9BXJ2 289 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.9□□□□□ -0.342e-13■■■■□ 22.5
CHD4-211ENST00000544484 ACSS2Q9NR19 701 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 ARHGAP28Q9P2N2 729 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 COG5Q9UP83 839 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 ABHD2P08910 425 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 C1DQ13901 141 aaKnown RBP12.9□□□□□ -0.34
CHD4-211ENST00000544484 CPSF6Q16630 551 aaKnown RBP eCLIP12.9□□□□□ -0.347e-10■□□□□ 10.9
CHD4-211ENST00000544484 PDK4Q16654 411 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 PAGE2BQ5JRK9 111 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 DLK2Q6UY11 383 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 LPCAT2Q7L5N7 544 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 OTOP3Q7RTS5 596 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 ACTRT2Q8TDY3 377 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 LHX5Q9H2C1 402 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 GPSM3Q9Y4H4 160 aa12.9□□□□□ -0.34
CHD4-211ENST00000544484 ASGR1P07306 291 aa12.9□□□□□ -0.35
CHD4-211ENST00000544484 HGFP14210 728 aa12.9□□□□□ -0.35
CHD4-211ENST00000544484 GRIA3P42263 894 aa12.9□□□□□ -0.35
CHD4-211ENST00000544484 RPL38P63173 70 aaKnown RBP12.9□□□□□ -0.35
CHD4-211ENST00000544484 PLPP4Q5VZY2 271 aa12.9□□□□□ -0.35
CHD4-211ENST00000544484 HLA-DQA1Q5Y7H0 255 aa12.9□□□□□ -0.35
CHD4-211ENST00000544484 ZDHHC13Q8IUH4 622 aa12.9□□□□□ -0.35
CHD4-211ENST00000544484 MREGQ8N565 214 aa12.9□□□□□ -0.35
CHD4-211ENST00000544484 GMIPQ9P107 970 aa12.9□□□□□ -0.35
CHD4-211ENST00000544484 SLC17A7Q9P2U7 560 aa12.9□□□□□ -0.35
CHD4-211ENST00000544484 ENTPD4Q9Y227 616 aa12.9□□□□□ -0.35
CHD4-211ENST00000544484 MRC1P22897 1456 aa12.9□□□□□ -0.35
CHD4-211ENST00000544484 IGLV3-22A0A075B6J6 115 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 E7ENQ6 273 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 ALOX15BO15296 676 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 CDC25CP30307 473 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 RABGGTBP53611 331 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 SEMA5AQ13591 1074 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 FUKQ8N0W3 1084 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 PRRG3Q9BZD7 231 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 PCDH12Q9NPG4 1184 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 NDUFA13Q9P0J0 144 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 DDX3YO15523 660 aaKnown RBP12.89□□□□□ -0.35
CHD4-211ENST00000544484 TLL1O43897 1013 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 ULK1O75385 1050 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 KCNH1O95259 989 aa12.89□□□□□ -0.35
CHD4-211ENST00000544484 MC4RP32245 332 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms