RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 SLC41A1Q8IVJ1 513 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 WDR75Q8IWA0 830 aaKnown RBP17.25■□□□□ 0.35
PTPRO-209ENST00000543886 TNS4Q8IZW8 715 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 ARRDC2Q8TBH0 407 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 SEMA3CQ99985 751 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 MAGEH1Q9H213 219 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 YIPF1Q9Y548 306 aa17.25■□□□□ 0.35
PTPRO-209ENST00000543886 ZFP37Q9Y6Q3 630 aaPredicted RBP17.25■□□□□ 0.35
PTPRO-209ENST00000543886 TTC24A2A3L6 582 aaPredicted RBP17.24■□□□□ 0.35
PTPRO-209ENST00000543886 FCHO1O14526 889 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 ITM2AO43736 263 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 GABRB3P28472 473 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 MNX1P50219 401 aaPredicted RBP17.24■□□□□ 0.35
PTPRO-209ENST00000543886 CDH4P55283 916 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 DSG1Q02413 1049 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 GNA12Q03113 381 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 PLD1Q13393 1074 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 SLC12A1Q13621 1099 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 ITGA9Q13797 1035 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 TSTD2Q5T7W7 516 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 IL31Q6EBC2 164 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 NEPROQ6NW34 567 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 LCA5Q86VQ0 697 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 BBS5Q8N3I7 341 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 C2CD4AQ8NCU7 369 aaPredicted RBP17.24■□□□□ 0.35
PTPRO-209ENST00000543886 PIWIL2Q8TC59 973 aaKnown RBP17.24■□□□□ 0.35
PTPRO-209ENST00000543886 CALML6Q8TD86 181 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 TADA1Q96BN2 335 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 ZNF599Q96NL3 588 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 TASP1Q9H6P5 420 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 DNAJC16Q9Y2G8 782 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 COL4A6Q14031 1691 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 FAM95CA0A1B0GW59 222 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 PHGDHO43175 533 aaKnown RBP17.24■□□□□ 0.35
PTPRO-209ENST00000543886 RFC2P35250 354 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 CD151P48509 253 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 SIRPB2Q5JXA9 342 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 C1orf53Q5VUE5 145 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 FAM117BQ6P1L5 589 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 ALYREFQ86V81 257 aaKnown RBP17.24■□□□□ 0.35
PTPRO-209ENST00000543886 SLC39A11Q8N1S5 342 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 IFT43Q96FT9 208 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 MYRFLQ96LU7 910 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 HERC2P3Q9BVR0 1158 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 PDFQ9HBH1 243 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 LNPEPQ9UIQ6 1025 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 FBXO5Q9UKT4 447 aa17.24■□□□□ 0.35
PTPRO-209ENST00000543886 PRRG1O14668 218 aa17.23■□□□□ 0.35
PTPRO-209ENST00000543886 H2AFYO75367 372 aaKnown RBP17.23■□□□□ 0.35
PTPRO-209ENST00000543886 ATP6V1G2O95670 118 aa17.23■□□□□ 0.35
PTPRO-209ENST00000543886 STMN1P16949 149 aa17.23■□□□□ 0.35
PTPRO-209ENST00000543886 CORO1AP31146 461 aaKnown RBP17.23■□□□□ 0.35
PTPRO-209ENST00000543886 AVPR1AP37288 418 aa17.23■□□□□ 0.35
PTPRO-209ENST00000543886 NUMBP49757 651 aa17.23■□□□□ 0.35
PTPRO-209ENST00000543886 CSRP3P50461 194 aa17.23■□□□□ 0.35
PTPRO-209ENST00000543886 ABCE1P61221 599 aaKnown RBP17.23■□□□□ 0.35
PTPRO-209ENST00000543886 KIAA0408Q6ZU52 694 aa17.23■□□□□ 0.35
PTPRO-209ENST00000543886 TOP1MTQ969P6 601 aa17.23■□□□□ 0.35
PTPRO-209ENST00000543886 ELMO2Q96JJ3 720 aa17.23■□□□□ 0.35
PTPRO-209ENST00000543886 RILPQ96NA2 401 aa17.23■□□□□ 0.35
PTPRO-209ENST00000543886 A0A0D9SEW6 157 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 ABHD14A-ACY1A0A1B0GW23 586 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 STC2O76061 302 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 PAPSS2O95340 614 aaPredicted RBP17.22■□□□□ 0.35
PTPRO-209ENST00000543886 URODP06132 367 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 ATP5BP06576 529 aaKnown RBP17.22■□□□□ 0.35
PTPRO-209ENST00000543886 SLC35E2BP0CK96 405 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 COL6A2P12110 1019 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 RAB10P61026 200 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 RPS24P62847 133 aaKnown RBP17.22■□□□□ 0.35
PTPRO-209ENST00000543886 RIPK1Q13546 671 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 IHHQ14623 411 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 KRT72Q14CN4 511 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 GPATCH11Q8N954 259 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 RDH11Q8TC12 318 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 SLC7A6OSQ96CW6 309 aaPredicted RBP17.22■□□□□ 0.35
PTPRO-209ENST00000543886 TRMT2BQ96GJ1 504 aaKnown RBP17.22■□□□□ 0.35
PTPRO-209ENST00000543886 NSL1Q96IY1 281 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 SCYL1Q96KG9 808 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 NMUR2Q9GZQ4 415 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 CRISPLD2Q9H0B8 497 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 ARL8BQ9NVJ2 186 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 BAIAP2L1Q9UHR4 511 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 ACOT9Q9Y305 439 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 LOC285095A0A1B0GVY8 99 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 G3V2L1 256 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 TRAFD1O14545 582 aaPredicted RBP17.22■□□□□ 0.35
PTPRO-209ENST00000543886 CCDC22O60826 627 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 CLDN11O75508 207 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 CLTBP09497 229 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 IRF1P10914 325 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 DNAJB1P25685 340 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 PTPN4P29074 926 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 CRABP2P29373 138 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 ELF1P32519 619 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 SLC12A2P55011 1212 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 OXCT1P55809 520 aa17.22■□□□□ 0.35
PTPRO-209ENST00000543886 BTG3Q14201 252 aaPredicted RBP17.22■□□□□ 0.35
PTPRO-209ENST00000543886 TMCO2Q7Z6W1 182 aaPredicted RBP17.22■□□□□ 0.35
PTPRO-209ENST00000543886 TTC7BQ86TV6 843 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms